CN184462

Overview
NameCN184462
Unique NameCN184462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length445
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184462 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 1.387e-72
Identity = 131/147 (89.12%), Postives = 135/147 (91.84%), Query Frame = 2
Query:    5 SQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPXGNSLKRVEATTGCRVY 445
            SQYL+ELLAEHQKL PF QVLPICSRLL QE+FRVSGMM NQGFGDFDRLRHRSPSPMASSNLMSNV+ TGLGGWNGL QERL G PGMTMDWQ AP SPSSYTVKRILRLEIPVD YPNFNFVGRLLGP GNSLKRVEATTGCRV+
Sbjct:   30 SQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVF 176          
BLAST of CN184462 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 3.091e-72
Identity = 127/147 (86.39%), Postives = 136/147 (92.52%), Query Frame = 2
Query:    5 SQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPXGNSLKRVEATTGCRVY 445
            SQY+S+LLAEHQKLGPF QVLPICSRLL QEIFR++GMMPNQGF DFDRLRHRSPSPMAS NLMSNV+G GLGGWNGLP ER+GGP GM M+WQ APASPSSY VKRILRL++PVDTYPNFNFVGRLLGP GNSLKRVEATTGCRVY
Sbjct:   29 SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVY 175          
BLAST of CN184462 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.006e-30
Identity = 76/148 (51.35%), Postives = 92/148 (62.16%), Query Frame = 2
Query:    2 RSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGW-NGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPXGNSLKRVEATTGCRV 442
            + +YLSELLAE  KL PF  VLP   RLL QEI RV+ ++ N        L H  PSP+AS  +  N A   + GW +  P ER   P     +W ++P S S    KR +R++IPVD YPNFNFVGRLLGP GNSLKRVEA+T CRV
Sbjct:   62 QEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQN-ARADMNGWASQFPSER-SVPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRV 205          
BLAST of CN184462 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.453e-29
Identity = 73/149 (48.99%), Postives = 94/149 (63.09%), Query Frame = 2
Query:    2 RSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGW-NGLPQER-LGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPXGNSLKRVEATTGCRV 442
            + +YLSELLAE  KL PF  VLP   RL+ QEI RV+ ++ N       + R   PSP+AS  +  N +   + GW +  P ER +   P    +W ++P S S   VKR +R++IPVD YPN+NFVGRLLGP GNSLKRVEA+T CRV
Sbjct:   58 QEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSPAP--NWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRV 199          
BLAST of CN184462 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.029e-27
Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 2
Query:    2 RSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQER---------LGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPXGNSLKRVEATTGCRVY 445
            R +YL+ELL E QKLGPF QV+P C RLL  EI RVS       F D DR  H SP           +    L GW+ +  E            GP    + W   P  P+   VK+++RL++PVD YP++NFVGR+LGP GNSLKRVE  T CRV+
Sbjct:   42 RERYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVSS------FPDLDRYEHGSPFRSLGQPTNGKL---DLEGWSMMQAEENCHLQRASPFRGPS--PVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVF 187          
The following BLAST results are available for this feature:
BLAST of CN184462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
QKIL3_ARATH1.387e-7289.12KH domain-containing protein At2g38610 OS=Arabidop... [more]
QKIL4_ARATH3.091e-7286.39KH domain-containing protein At3g08620 OS=Arabidop... [more]
QKIL2_ARATH1.006e-3051.35KH domain-containing protein At5g56140 OS=Arabidop... [more]
QKIL1_ARATH1.453e-2948.99KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL5_ARATH3.029e-2744.59KH domain-containing protein At1g09660 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005I21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184462 ID=CN184462; Name=CN184462; organism=Citrus sinensis; type=EST; length=445bp
GAGGAGTCAATACTTGTCAGAGCTTTTAGCTGAGCATCAAAAGCTAGGAC
CTTTCACACAGGTGCTTCCGATATGCAGCCGACTGTTAACTCAAGAGATA
TTTCGGGTTTCTGGGATGATGCCCAATCAAGGATTTGGTGACTTTGACAG
ACTGCGGCATAGAAGCCCCAGCCCCATGGCTTCTTCAAATCTTATGTCAA
ACGTTGCAGGTACAGGGTTAGGTGGCTGGAATGGCCTACCTCAGGAGAGA
TTAGGTGGACCTCCTGGCATGACGATGGATTGGCAAAGTGCACCTGCAAG
CCCTAGTTCATATACAGTCAAGAGAATTTTGCGTTTGGAAATTCCAGTGG
ATACTTATCCTAACTTCAATTTTGTTGGACGGCTTCTTGGTCCANGGGGC
AATTCACTGAAACGGGTTGAAGCTACTACTGGCTGCCGTGTGTAC
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