CX676577

Overview
NameCX676577
Unique NameCX676577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5591 contig Csv1_Contig5591:1..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C63_ARATH (Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.062e-16
Identity = 47/62 (75.81%), Postives = 50/62 (80.65%), Query Frame = 1
Query:    1 AVLGRRVSD-DSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            AVLG  VS  DS     AERLSTDHNV VEEVRKEV+AL+PDDS IV+Y RGVWRIKGIIQV
Sbjct:  152 AVLGSVVSGVDSNKGAVAERLSTDHNVAVEEVRKEVKALNPDDSQIVLYTRGVWRIKGIIQV 213          
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C78_ORYSJ (Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.418e-15
Identity = 43/61 (70.49%), Postives = 46/61 (75.41%), Query Frame = 1
Query:    1 AVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            AVLGRR  D  +V   AERLS DHNV  EEVRKE+   HPDDS IV+Y RGVWRIKGIIQV
Sbjct:  159 AVLGRRGPDGREV--VAERLSNDHNVAEEEVRKELTEQHPDDSRIVIYTRGVWRIKGIIQV 217          
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C61_ORYSJ (Probable protein phosphatase 2C 61 OS=Oryza sativa subsp. japonica GN=Os07g0114000 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.696e-14
Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = 1
Query:    1 AVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            AVLGRR +    V   AERLST+HNV  EEVR+E+ ALHPDD  +VV+ARG WR+KGIIQV
Sbjct:  151 AVLGRRAAAGQTV---AERLSTEHNVASEEVRRELAALHPDDGEVVVHARGAWRVKGIIQV 208          
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C68_ARATH (Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.445e-14
Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 1
Query:    1 AVLGRRVSDDSKV-KVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            AVLG   S++++  K+ AE+L++DHN  +EEVR+E+ +LHPDDSHIVV   GVWRIKGIIQV
Sbjct:  173 AVLGSMGSNNNRSNKIVAEQLTSDHNAALEEVRQELRSLHPDDSHIVVLKHGVWRIKGIIQV 234          
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C29_ORYSJ (Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.199e-13
Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 AVLGRRVSDDS------KVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            AVLGRR +  +      K +V  ERLS DHNV  E+VR+E++ LHPDDSHIV+   GVWRIKGIIQV
Sbjct:  161 AVLGRRSAAGAAHGRKGKNRVVPERLSRDHNVADEDVRRELKELHPDDSHIVLNTHGVWRIKGIIQV 227          
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSJ (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1
Query:    1 AVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            AVLGRRV         AERL+ +HN   EEVR+E+ AL+PDD+ IVV+ARG WR+KGIIQV
Sbjct:  152 AVLGRRVVGGGVA--VAERLTDEHNAASEEVRRELTALNPDDAQIVVHARGAWRVKGIIQV 210          
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSI (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1
Query:    1 AVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            AVLGRRV         AERL+ +HN   EEVR+E+ AL+PDD+ IVV+ARG WR+KGIIQV
Sbjct:  152 AVLGRRVVGGGVA--VAERLTDEHNAASEEVRRELTALNPDDAQIVVHARGAWRVKGIIQV 210          
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C43_ORYSJ (Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584366 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 1
Query:   40 KVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            K+ AE+L+ DHN  +EEVR+E+ +LHPDDS IVV   GVWRIKGIIQV
Sbjct:  180 KIVAEQLTRDHNASMEEVRQELRSLHPDDSQIVVLKNGVWRIKGIIQV 227          
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C79_ARATH (Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.994e-11
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1
Query:    1 AVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            AVLG+ +    +V   A +LS +HNV +E VR+E+ +LHPDDSHIVV    VWR+KGIIQV
Sbjct:  173 AVLGKVIKATGEVN--ALQLSAEHNVSIESVRQEMHSLHPDDSHIVVLKHNVWRVKGIIQV 231          
BLAST of CX676577 vs. ExPASy Swiss-Prot
Match: P2C72_ORYSJ (Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.107e-11
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 1
Query:    1 AVLGRRVSDDSKVKVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQV 183
            AVLGR V    +V   A +LS +HN   EEVR+E++A HPDD HIVV    VWR+KGIIQ+
Sbjct:  174 AVLGRLVKGTGEV--LAMQLSAEHNASFEEVRRELQAAHPDDPHIVVLKHNVWRVKGIIQI 232          
The following BLAST results are available for this feature:
BLAST of CX676577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
P2C63_ARATH1.062e-1675.81Probable protein phosphatase 2C 63 OS=Arabidopsis ... [more]
P2C78_ORYSJ3.418e-1570.49Probable protein phosphatase 2C 78 OS=Oryza sativa... [more]
P2C61_ORYSJ1.696e-1465.57Probable protein phosphatase 2C 61 OS=Oryza sativa... [more]
P2C68_ARATH6.445e-1461.29Probable protein phosphatase 2C 68 OS=Arabidopsis ... [more]
P2C29_ORYSJ3.199e-1359.70Probable protein phosphatase 2C 29 OS=Oryza sativa... [more]
P2C34_ORYSJ3.537e-1260.66Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C34_ORYSI3.537e-1260.66Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C43_ORYSJ7.879e-1266.67Probable protein phosphatase 2C 43 OS=Oryza sativa... [more]
P2C79_ARATH2.994e-1155.74Probable protein phosphatase 2C 79 OS=Arabidopsis ... [more]
P2C72_ORYSJ5.107e-1155.74Probable protein phosphatase 2C 72 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70G12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70G12-M24-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676577 ID=CX676577; Name=CX676577; organism=Citrus sinensis; type=EST; length=834bp
GCAGTTCTTGGGCGGAGAGTTTCAGACGATAGCAAAGTTAAGGTGGCAGC
AGAACGGTTGTCAACTGATCATAACGTTGGAGTTGAGGAGGTGAGGAAGG
AAGTCGAGGCACTTCATCCTGATGATTCACATATAGTCGTGTATGCCCGT
GGAGTTTGGAGAATAAAGGGTATAATTCAGGTATACGATCAAGCTCCTTC
ATCCCAATTTGATTGATTCTTATATTTTTCTGTTAGCATTTATGAGTGAA
AATTAGTCATCTGACATGTTTTCTTTTGTCTGCACATTCGGAATAATTTT
AACTGGTAGTGAGGATGATATCTTTGTGTCTTTCGATTTCATGAGCCTGT
TCCCTCCTCGTATTCACCTGCATTAGAAGCAACTCCTCCATTGAAGTTCT
TGGAATGACTCTTTCTGGGACCTAATAGATGATCATTTGATATGAGGATT
TGGTGCTTTTGATAAATTTTTTCTAATGCATTCTGTTTATTCCGTTTTAA
ACTTAATGCTTTTTAATGTAAATTCTGGAGTCTGTGGTCTTTGATGCTGA
AGTTAGTTGAAGTATTACTACCTCGGAATGGAATATAGCTCTGGTCTTGA
CAGAATTGCGTTTCTGCAGTCCGCCGTGCTTTTTCTTTTGATGTTTCAAA
GAGCATCAGAGTATCTTATATTTGATTGAAACGCGGGGACTTGCTTGCAA
AATTGTCCAAGCATCTGCTGTCGTATCAGTGTGCTAGAACCTGATAGATA
CGGGTGTCTATTCTCGATCTTTGCCTCTAGAAGGTGTCAAGATCTATTGG
TGATGTTTACTTGAAGAAACCCGATTTTTATAGA
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