CX676572

Overview
NameCX676572
Unique NameCX676572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig409 contig Csv1_Contig409:45..513. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX676572 vs. ExPASy Swiss-Prot
Match: QCR8_SOLTU (Cytochrome b-c1 complex subunit 8 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 8.767e-31
Identity = 60/72 (83.33%), Postives = 67/72 (93.06%), Query Frame = 3
Query:   18 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQNYQEKEKLAHRY 233
            MGKQPV++KAVVYA+SPFQQKIMPGLWKDL GKIHHKVS+NWIS  LLLGPLVGTY+YVQ++ EKEKL HRY
Sbjct:    1 MGKQPVKLKAVVYAISPFQQKIMPGLWKDLPGKIHHKVSENWISATLLLGPLVGTYSYVQHFLEKEKLEHRY 72          
The following BLAST results are available for this feature:
BLAST of CX676572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QCR8_SOLTU8.767e-3183.33Cytochrome b-c1 complex subunit 8 OS=Solanum tuber... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_70G09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70G09-M18-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676572 ID=CX676572; Name=CX676572; organism=Citrus sinensis; type=EST; length=469bp
GAGAGAAATCAAAAGACATGGGAAAGCAGCCGGTGAGAATGAAGGCGGTG
GTGTACGCACTGTCGCCATTTCAACAAAAGATTATGCCGGGGCTTTGGAA
GGATCTGACCGGTAAGATCCATCACAAGGTCTCCGATAATTGGATCAGCA
CTATCCTTTTGCTCGGTCCTCTCGTCGGCACCTACGCGTATGTCCAAAAT
TACCAGGAGAAGGAGAAGTTGGCACACAGGTATTGAAGCAAGCTGATGTG
CCTCTATTTTTTCAGAAGCTTAAGGTTCTTGTGAATTAGCTACAACTCTT
GTTGAAGTTGTGAAACATAATTGAAATTGCTATGTAGTTGAGACTACAGT
AGTTTGATTTGTGGGTTTTGTTGATGGATTGAGAACTATTGTCAAAATTC
TGAGCAATATTTTCTCTTTCTTTTGATGAAATAAATTTGATGCATGGATT
GCTAAAAAAAAAAAAAAAA
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