CX676568

Overview
NameCX676568
Unique NameCX676568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4114 contig Csv1_Contig4114:86..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.655e-58
Identity = 101/165 (61.21%), Postives = 127/165 (76.97%), Query Frame = -3
Query:  246 CDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG---RGMCGMNTM 731
            CD  E  +CD+GC+GGLMT A+ YL   GGLE E  YPY G  GKC+FD  KI   V NF+ + VDE QI+A+L+ HGPLAIG+NA +MQTYIGGVSCP ICG+  L+HGVLLVGYGA GF+ +RL ++PYWIIKNSWG+ WG++GYY++CRG   R  CG+++M
Sbjct:  196 CDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRH-LDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSM 359          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.588e-55
Identity = 87/162 (53.70%), Postives = 127/162 (78.40%), Query Frame = -3
Query:  246 CDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 731
            CD ++ G+CD+GC+GGLM NA++YL+ +GG+ +E  Y Y G+ G C+FD  K+   V+NF+ + +DE+QIAA+LV +GPLA+ +NA +MQTY+ GVSCP +C K  L+HGVLLVG+G   ++ +RL  +PYWIIKNSWG+ WG+ GYY++CRGR +CG+++M
Sbjct:  191 CDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSM 352          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.993e-55
Identity = 94/163 (57.67%), Postives = 128/163 (78.53%), Query Frame = -3
Query:  246 CDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGK-CQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 731
            CD +E  +CD+GC+GGLM +A++Y + TGGL +E  YPY GK GK C+ D  KI   V+NF+ I +DE QIAA+LV +GPLA+ +NA +MQTYIGGVSCP IC ++ LNHGVLLVGYGA G++  R   +PYWIIKNSWG+ WG++G+Y++C+GR +CG+++M
Sbjct:  194 CDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRR-LNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSM 355          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 7.993e-55
Identity = 91/163 (55.83%), Postives = 129/163 (79.14%), Query Frame = -3
Query:  246 CDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRG-KCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 731
            CD +E+G+CD+GC+GGLM +A++Y + TGGL  E  YPY G  G  C+ D  KI   V+NF+ + ++E+QIAA+L+ +GPLA+ +NA +MQTYIGGVSCP IC ++ LNHGVLLVGYG+ GFS  RL  +PYWIIKNSWG+ WG++G+Y++C+GR +CG++++
Sbjct:  191 CDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRR-LNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 352          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 5.205e-38
Identity = 76/153 (49.67%), Postives = 102/153 (66.67%), Query Frame = -3
Query:  252 CDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRG-KCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMN 707
            CD GC+GGL  NAY Y+I  GG++ ESSYPY  + G +C F+S  I  +++NFT IP +E  +A ++V  GPLAI  +A+  Q YIGGV   + C    L+HG+L+VGY AK  +I R  N PYWI+KNSWG  WG+ GY  L RG+  CG++
Sbjct:  186 CDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGV-FDIPCNPNSLDHGILIVGYSAKN-TIFR-KNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVS 335          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.856e-36
Identity = 69/155 (44.52%), Postives = 103/155 (66.45%), Query Frame = -3
Query:  246 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCP--LICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 704
            D+GC+GGL +NAY+ +I  GGL  E +YPY  K  KC   ++ +AV + +  N+  DE ++AA L H+  +++G+NA+ +Q Y  G+S P  + C K  L+H VLLVGYG          N+P+WI+KNSWG +WG++GY+R+ RG G CG+NT+
Sbjct:  164 DDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGINTV 312          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.085e-35
Identity = 75/158 (47.47%), Postives = 102/158 (64.56%), Query Frame = -3
Query:  246 TCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCP--LICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 710
            T D+ C+GGLM NAYK +   GGLE E+ YPY  K+ +C F+     V+VA F ++P  +E  +   L+ +GP++IG+NA  MQ Y GGVS P   +C KK L+HGVL+VGYG   +        PYWI+KNSWG +WG+ GYYR+ RG   CG++ M
Sbjct:  451 TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFH-KTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEM 607          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.719e-31
Identity = 54/85 (63.53%), Postives = 74/85 (87.06%), Query Frame = -3
Query:  246 GPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 500
            GPLA+ +NA +MQTYIGGVSCP IC ++ LNHGVLLVGYG+ G++ +RL  +PYW+IKNSWG+ WG++GYY++CRGR +CG+++M
Sbjct:    1 GPLAVAINAAYMQTYIGGVSCPYICSRR-LNHGVLLVGYGSAGYAPIRLKEKPYWVIKNSWGENWGENGYYKICRGRNICGVDSM 84          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.163e-31
Identity = 67/155 (43.23%), Postives = 89/155 (57.42%), Query Frame = -3
Query:  246 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPL--ICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 704
            D  C GGL +NAY  +   GGLE E  Y Y G    C F +EK  V + +   +  +E ++AA L   GP+++ +NA  MQ Y  G+S PL  +C    ++H VLLVGYG +        + P+W IKNSWG  WG+ GYY L RG G CG+NTM
Sbjct:  330 DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTM 477          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.049e-31
Identity = 67/155 (43.23%), Postives = 89/155 (57.42%), Query Frame = -3
Query:  246 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPL--ICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 704
            D  C GGL +NAY  +   GGLE E  Y Y G    C F ++   V + +   +  +EN+IAA L   GP+++ +NA  MQ Y  G++ P   +C   +++H VLLVGYG +        N PYW IKNSWG  WG+ GYY L RG G CG+NTM
Sbjct:  308 DKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTM 455          
The following BLAST results are available for this feature:
BLAST of CX676568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CYSP1_MAIZE2.655e-5861.21Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP_PEA3.588e-5553.70Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
RD19A_ARATH7.993e-5557.67Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH7.993e-5555.83Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_DICDI5.205e-3849.67Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SCHMA2.856e-3644.52Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CPR1_DROME1.085e-3547.47Putative cysteine proteinase CG12163 OS=Drosophila... [more]
PAPA5_CARPA4.719e-3163.53Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
CATF_HUMAN6.163e-3143.23Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATF_MOUSE8.049e-3143.23Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70G07-M14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676568 ID=CX676568; Name=CX676568; organism=Citrus sinensis; type=EST; length=742bp
GGAAGACACAATAGTATGTAGAAGAGCAGGTCTGAAAAGCATTTTCAAGT
CTAATCCAGAACTTACTTGAGAAAGGGGAATTATGAAACCGGAAAAGCTT
CAATAATTAGAAGATCACAAACAAGAACAAAAGGGAAACTAGCTACCATA
TAACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGA
GGGACTTCAAGTTTAGGAGGAGACTTGAGTGACCACTGCAGAAACCATGG
TGTTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGG
TCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATACGGCTGGTT
TCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACGAGCAGAA
CGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATGAGACTCCC
CCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACC
GTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGG
TAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTG
CCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGT
CGCGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGAACAACCAT
TGTCACAAGTACCCTTCTCCTTTATATCACACTACGCATTGA
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