EG358204

Overview
NameEG358204
Unique NameEG358204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length449
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig160 contig Csv1_Contig160:1307..1755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 7.638e-26
Identity = 56/118 (47.46%), Postives = 80/118 (67.80%), Query Frame = 1
Query:    7 DPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH-SYLIKDQIASVLGDHV 357
            DPK++KA+++ICR MDD+  H+F  +R    SAIECY KQ+GV+ +EA   F + + ++WKD+NEE  +KPT +  P+L   LNLAR +D +Y+E DGYTH     K  I S+L D +
Sbjct:  437 DPKIIKASTIICRFMDDIAEHKFNHRREDDCSAIECYMKQYGVTAQEAYNEFNKHIESSWKDVNEE-FLKPTEMPTPVLCRSLNLARVMDVLYREGDGYTHVGKAAKGGITSLLIDPI 553          
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.791e-25
Identity = 55/117 (47.01%), Postives = 80/117 (68.38%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTHSYLIKDQIASVLGDHVP 360
            PK+  A+ +I R  DD+  +EFE KR HVA+ I+CY +Q GVSKE A+++    V++AWKD+N+EL M+P V   PLL  +LNL+R ID  Y+  D YT+  L+K+ I S+L + +P
Sbjct:  431 PKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQEL-MRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPKLLKEHIVSLLIETIP 546          
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.219e-23
Identity = 48/101 (47.52%), Postives = 73/101 (72.28%), Query Frame = 1
Query:    7 DPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 309
            DPK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GVS +EA  +F + V +AWKD+N+E   KPT +   +L   LNLAR +D +Y+E DGYT+
Sbjct:  436 DPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVSAQEAYDVFNKHVESAWKDVNQE-FQKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.080e-23
Identity = 47/101 (46.53%), Postives = 74/101 (73.27%), Query Frame = 1
Query:    7 DPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 309
            DPK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GV+ +EA  +F + V +AWKD+N+E  +KPT +   +L   LNLAR +D +Y+E DGYT+
Sbjct:  436 DPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNKE-FLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.080e-23
Identity = 47/101 (46.53%), Postives = 74/101 (73.27%), Query Frame = 1
Query:    7 DPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 309
            DPK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GV+ +EA  +F + V +AWKD+N+E  +KPT +   +L   LNLAR +D +Y+E DGYT+
Sbjct:  436 DPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQE-FLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.032e-22
Identity = 46/101 (45.54%), Postives = 73/101 (72.28%), Query Frame = 1
Query:    7 DPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 309
            DPK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GV+ +EA  +F + V +AWKD+N+   +KPT +   +L   LNLAR +D +Y+E DGYT+
Sbjct:  436 DPKIIQASTIICRFMDDVTEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNQG-FLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.141e-21
Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 1
Query:    7 DPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTHSYLIKDQIASVLGDHV 357
            +PK+  A+    RL++D+  H  EQ+RGHVAS I+CY  QHGVSK+EA+K+ ++   + WK+INEE M +  V    L+  I+NLAR  D  YK  DGYT S  +K  +  +  D +
Sbjct:  484 NPKLSYASGAFIRLVNDLTSHVTEQQRGHVASCIDCYMNQHGVSKDEAVKILQKMATDCWKEINEECMRQSQVSVGHLM-RIVNLARLTDVSYKYGDGYTDSQQLKQFVKGLFVDPI 599          
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 2.811e-20
Identity = 49/121 (40.50%), Postives = 80/121 (66.12%), Query Frame = 1
Query:    1 TRDPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKED-DGYTH-SYLIKDQIASVLGDHV 357
            +++PK+++A+ +ICR++DD   +E E+ RG +A+ IEC  + +G+S +EA+  F+     AWKDINE L ++PT V+   L  ILNLAR ++  Y  + DGYTH   ++K  I ++L D +
Sbjct:  427 SKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGL-LRPTPVSTEFLTPILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSI 546          
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.015e-18
Identity = 42/101 (41.58%), Postives = 64/101 (63.37%), Query Frame = 1
Query:    7 DPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 309
            +P +V A  ++CR MDD+  H+ EQ R HVAS IECY KQ   S+++A +   ++V +AWK+IN E M+    V   +   +LN +R++D +YK  D +TH
Sbjct:  428 NPPLVNACCLLCRTMDDLGSHKGEQDRKHVASTIECYMKQFDASEQQAYESLNKKVEDAWKEINREFMITCKDVNIHVAMRVLNFSRSVDVLYKNKDHFTH 528          
BLAST of EG358204 vs. ExPASy Swiss-Prot
Match: BARS_ARATH (Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 9.684e-13
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 309
            PK+V+      RLMDD+   E + ++G+ A+A+  Y  +HGV+KEEA +  E+   +  K +NEE  +K T + R +L   +N AR++D +Y  DD Y H
Sbjct:  440 PKLVRILGAKTRLMDDIADFEEDMEKGYTANALNYYMNEHGVTKEEASRELEKMNGDMNKIVNEE-CLKITTMPRRILMQSVNYARSLDVLYTADDVYNH 538          
The following BLAST results are available for this feature:
BLAST of EG358204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
DCS3_GOSAR7.638e-2647.46(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
HUMS_ARATH3.791e-2547.01Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
DCS4_GOSAR1.219e-2347.52(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS2_GOSAR2.080e-2346.53(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSAR2.080e-2346.53(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS1_GOSHI1.032e-2245.54(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
CASS_RICCO1.141e-2143.59Casbene synthase, chloroplastic OS=Ricinus communi... [more]
5EAS_TOBAC2.811e-2040.50Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
ECS1_ARTAN2.015e-1841.58Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
BARS_ARATH9.684e-1338.00Alpha-barbatene synthase OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank description6d1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0006d1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358204 ID=EG358204; Name=EG358204; organism=Citrus sinensis; type=EST; length=449bp
ACGCGGGACCCTAAGGTTGTAAAAGCAGCATCAGTTATCTGCAGACTCAT
GGATGACATGCAAGGTCATGAGTTTGAGCAGAAGAGAGGACATGTTGCGT
CAGCTATTGAATGTTACACGAAGCAGCATGGTGTCTCTAAGGAAGAGGCA
ATTAAAATGTTTGAAGAAGAAGTTGCAAATGCATGGAAAGATATTAACGA
GGAGTTGATGATGAAGCCAACCGTCGTTGCCCGACCACTGCTCGGGACGA
TTCTTAATCTTGCTCGTGCAATTGATTTTATTTACAAAGAGGACGACGGC
TATACGCATTCTTACCTAATTAAAGATCAAATTGCTTCTGTGCTAGGAGA
CCACGTTCCATTTTGACGACTAGTTCTATACTTCTATTAATAATATTTTC
AGTTCCTTGGTTTGTGTTTGAAGGAAATACGGTGTATCGTATTGGTCTG
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