CN189226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189226 vs. ExPASy Swiss-Prot
Match: ATG4_MEDTR (Cysteine protease ATG4 OS=Medicago truncatula GN=ATG4 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.577e-45 Identity = 97/191 (50.79%), Postives = 118/191 (61.78%), Query Frame = 2 Query: 167 VMKGFREKAGASKCFSKSTPDTPNRSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRL 739 V+K ++ A+KC SKS+ + + + ETYSESS+SEKK VH++++GW AAV+++V+ GSMRR ERVLG RT +SSS DIWLLGVCHKI+Q F QDF SRILI+YRKGFD I DSK TSDV WGCMLRSSQMLVAQALLFH+L Sbjct: 2 VLKDLCDRIVAAKCSSKSSTEIVDNTQVPASSKAGSSDSKFPKASLWSTFFTSGFSVDETYSESSSSEKKTVHSRNSGWAAAVRKVVSGGSMRRFQERVLGSCRTDVSSSDGDIWLLGVCHKISQHESTGDVDIRNVFAAFEQDFFSRILITYRKGFDAIEDSKYTSDVNWGCMLRSSQMLVAQALLFHKL 192
BLAST of CN189226 vs. ExPASy Swiss-Prot
Match: ATG4A_ARATH (Cysteine protease ATG4a OS=Arabidopsis thaliana GN=ATG4A PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.851e-35 Identity = 75/134 (55.97%), Postives = 93/134 (69.40%), Query Frame = 2 Query: 341 ETYSESSASEKKAVHNKSNGWTAAVKRL-VTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRL 739 + Y ESS S K V NGWTA VKR+ + +G++RR ERVLGP+RTG+ S+TSD+WLLGVC+KI+ DFSS+IL++YRKGF+P D+ TSDV WGCM+RSSQML AQALLFHRL Sbjct: 55 QPYRESSTSGHKQVCTTRNGWTAFVKRVSMASGAIRRFQERVLGPNRTGLPSTTSDVWLLGVCYKISADENSGETDTGTVLAALQLDFSSKILMTYRKGFEPFRDTTYTSDVNWGCMIRSSQMLFAQALLFHRL 188
BLAST of CN189226 vs. ExPASy Swiss-Prot
Match: ATG4B_ARATH (Cysteine protease ATG4b OS=Arabidopsis thaliana GN=ATG4B PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.585e-33 Identity = 72/130 (55.38%), Postives = 89/130 (68.46%), Query Frame = 2 Query: 353 ESSASEKKAVHNKSNGWTAAVKRL-VTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRL 739 E+S S V + WT +K + +G++RR +RVLGPSRTGISSSTS+IWLLGVC+KI++ F QDFSS IL++YR+GF+PIGD+ TSDV WGCMLRS QML AQALLF RL Sbjct: 62 EASTSGHNPVCTTHSSWTVILKTASMASGAIRRFQDRVLGPSRTGISSSTSEIWLLGVCYKISEGESSEEADAGRVLAAFRQDFSSLILMTYRRGFEPIGDTTYTSDVNWGCMLRSGQMLFAQALLFQRL 191
BLAST of CN189226 vs. ExPASy Swiss-Prot
Match: ATG4A_ORYSJ (Cysteine protease ATG4A OS=Oryza sativa subsp. japonica GN=ATG4A PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.018e-25 Identity = 62/133 (46.62%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 341 ETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRL 739 E + +SSA+ H+ S W+ ++R+ GSM R LG S+ + ++SD+W LG C+K++ F +DFSSRI I+YRKGFD I DSK TSDV WGCM+RSSQMLVAQAL+FH L Sbjct: 54 EAHQDSSANRSLKPHSGSYAWSRFLRRIACTGSMWRF----LGASK---ALTSSDVWFLGKCYKLSSEELSNSSDCESGNAAFLEDFSSRIWITYRKGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHL 179
BLAST of CN189226 vs. ExPASy Swiss-Prot
Match: ATG4A_ORYSI (Cysteine protease ATG4A OS=Oryza sativa subsp. indica GN=ATG4A PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.268e-25 Identity = 62/133 (46.62%), Postives = 81/133 (60.90%), Query Frame = 2 Query: 341 ETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRL 739 E + +SSA H+ S W+ ++R+ GSM R LG S+ + ++SD+W LG C+K++ F +DFSSRI I+YRKGFD I DSK TSDV WGCM+RSSQMLVAQAL+FH L Sbjct: 53 EAHQDSSAHRPLKPHSGSYAWSRFLRRIACTGSMWRF----LGASK---ALTSSDVWFLGKCYKLSSEELSNSSDCESGNAAFLEDFSSRIWITYRKGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHL 178
BLAST of CN189226 vs. ExPASy Swiss-Prot
Match: ATG4B_ORYSJ (Cysteine protease ATG4B OS=Oryza sativa subsp. japonica GN=ATG4B PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.869e-25 Identity = 61/133 (45.86%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 341 ETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRL 739 E + +SSA++ + S W+ ++R+V +GSM R LG S+ ++SD+W LG C+K++ F +DFSSRI I+YR+GFD I DSK TSDV WGCM+RSSQMLVAQAL+FH L Sbjct: 57 EAHQDSSANKSPKSSSGSYDWSRVLRRIVCSGSMWRF----LGTSKV---LTSSDVWFLGKCYKLSSEESSSDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHL 182
BLAST of CN189226 vs. ExPASy Swiss-Prot
Match: ATG4B_ORYSI (Cysteine protease ATG4B OS=Oryza sativa subsp. indica GN=ATG4B PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.600e-25 Identity = 61/133 (45.86%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 341 ETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRL 739 E + +SSA++ + S W ++R+V +GSM R LG S+ ++SD+W LG C+K++ F +DFSSRI I+YR+GFD I DSK TSDV WGCM+RSSQMLVAQAL+FH L Sbjct: 57 EAHQDSSANKSPKSSSGSYDWLRVLRRIVCSGSMWRF----LGTSKV---LTSSDVWFLGKCYKLSSEESSSDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHL 182 The following BLAST results are available for this feature:
BLAST of CN189226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189226 ID=CN189226; Name=CN189226; organism=Citrus sinensis; type=EST; length=739bpback to top |