CN189215

Overview
NameCN189215
Unique NameCN189215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2717 contig Csv1_Contig2717:1..728. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: U533_DICDI (UPF0533 protein OS=Dictyostelium discoideum GN=DDB_G0269062 PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.405e-32
Identity = 80/220 (36.36%), Postives = 125/220 (56.82%), Query Frame = 1
Query:   76 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLV---LPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLY 726
            H L  +VMRL +P++    P+  +  DL      ++    + +   L    V ++ S+D    +  L+ ++ + I + GL V   L    G IYLGE FC YIS+NN S  +VR+V +K E+QT   RI LLD+ +  V +   G   DF+V+ +VKE G + LVC   Y+  EGE+K   ++FKF V NPL ++T++  +  + FLEAC+EN T+ +L+
Sbjct:    5 HLLNLKVMRLSKPNIPTINPILCEKQDL-----PYETMSTSIDSTSLSMGSVNSSGSND----NNQLIGNNGNPINMEGLGVTSMLQLQSGVIYLGEMFCCYISLNNHSPYQVRNVFLKVELQTTSSRIPLLDSEQQSVPTFNPGFSSDFVVQREVKESGVNILVCAVNYTTPEGEQKKFRKYFKFQVLNPLVLKTRIHNLPNVVFLEACLENATQGSLF 215          
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: CE044_XENTR (UPF0533 protein C5orf44 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.472e-29
Identity = 82/218 (37.61%), Postives = 117/218 (53.67%), Query Frame = 1
Query:   76 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-VRVVKEITFLEACIENHTKSNLY 726
            H LA +VMRL +P+L    P+  +  DL    D+F           L+  D +T K               A+++ L  +L LPQ FG I+LGETF SYIS++N S   V+D+ +KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK      +  FLEA I+N T S ++
Sbjct:   10 HLLALKVMRLTKPTLFTNIPVTCEERDL--PGDLFST---------LMKDDPSTVKG--------------AETLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDIQVKADLQTSSQR-LNLSASTAVVSELKPDSCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKMYFRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMF 201          
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: CE044_DANRE (UPF0533 protein C5orf44 homolog OS=Danio rerio GN=zgc:73187 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.472e-29
Identity = 83/218 (38.07%), Postives = 119/218 (54.59%), Query Frame = 1
Query:   76 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-VRVVKEITFLEACIENHTKSNLY 726
            H LA +VMRL +P+L    P+  +  DL    D+F           L+  D +T K               A+++ L  +L LPQ FG I+LGETF SYIS++N S+  V+D+++KA++QT  QR L L  S S V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK      +  FLEA I+N T S ++
Sbjct:   10 HLLALKVMRLTKPTLFTNMPVTCEDRDL--PGDLF---------LRLMKDDPSTVKG--------------AETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDILVKADLQTSSQR-LNLSASNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKLYFRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMF 201          
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: CE044_XENLA (UPF0533 protein C5orf44 homolog OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.511e-29
Identity = 82/218 (37.61%), Postives = 117/218 (53.67%), Query Frame = 1
Query:   76 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-VRVVKEITFLEACIENHTKSNLY 726
            H LA +VMRL +P+L    P+  +  DL    D+F           L+  D +T K +++              + L  +L LPQ FG I+LGETF SYIS++N S   V+DV +KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK      +  FLEA I+N T S ++
Sbjct:   10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFST---------LMKDDPSTVKGAEI--------------LMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDVQVKADLQTSSQR-LNLSASSAVVADLKPDSCIDDVIHHEVKEIGTHILVCAVSYTIQSGEKMYFRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMF 201          
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: CE044_PONAB (UPF0533 protein C5orf44 homolog OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 82/224 (36.61%), Postives = 120/224 (53.57%), Query Frame = 1
Query:   76 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLY 726
            H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T               + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I+N T S ++
Sbjct:   10 HLLALKVMRLTKPTLFTNIPVTCEERDL--PGDLFNQ---------LMRDDPSTV--------------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMF 207          
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: CE044_HUMAN (UPF0533 protein C5orf44 OS=Homo sapiens GN=C5orf44 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 82/224 (36.61%), Postives = 120/224 (53.57%), Query Frame = 1
Query:   76 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLY 726
            H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T               + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I+N T S ++
Sbjct:   10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMRDDPSTV--------------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMF 207          
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: CE044_BOVIN (UPF0533 protein C5orf44 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 81/224 (36.16%), Postives = 120/224 (53.57%), Query Frame = 1
Query:   76 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLY 726
            H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T   +++              + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I+N T S ++
Sbjct:   10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMRDDPSTVNGAEI--------------LMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQSGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMF 207          
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: CE044_RAT (UPF0533 protein C5orf44 homolog OS=Rattus norvegicus PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 81/224 (36.16%), Postives = 120/224 (53.57%), Query Frame = 1
Query:   76 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLY 726
            H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T   +++              + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I+N T S ++
Sbjct:   10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPSTVNGAEI--------------LMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMF 207          
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: CE044_MOUSE (UPF0533 protein C5orf44 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 81/224 (36.16%), Postives = 120/224 (53.57%), Query Frame = 1
Query:   76 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLY 726
            H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T   +++              + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I+N T S ++
Sbjct:   10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPSTVNGAEI--------------LMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMF 207          
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: U533_DROME (UPF0533 protein CG4953 OS=Drosophila melanogaster GN=CG4953 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.873e-25
Identity = 81/222 (36.49%), Postives = 122/222 (54.95%), Query Frame = 1
Query:   67 PGTHSLAFRVMRLCRPSL-HVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLL--DTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKV--RVVKEITFLEACIENHTKS 717
            P  H +A +VMRL RP+L  + P +  +PTDL                        ++++ SD       +    A+++    +L+LPQ+FG+IYLGETF SYI ++N++   V  V +KA++Q++  RI L   + +KSPV  +  GG  D ++ ++VKE+G H LVC   YS   G  + L +FFKF V  PL V+TK     + EI +LEA I+N T S
Sbjct:    6 PDAHLVALKVMRLMRPTLVGLGPVVTCEPTDLV--------------------QRFSSSQESD------GMSGACAETLAAGQVLLLPQSFGSIYLGETFASYICVHNTTPNPVECVTVKADLQSNTSRINLSMHENAKSPV-VLPPGGTIDDVIRYEVKEIGTHILVCEVNYSTPAGYAQSLRKFFKFQVLKPLDVKTKFYNAEIDEI-YLEAQIQNVTTS 199          
The following BLAST results are available for this feature:
BLAST of CN189215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
U533_DICDI5.405e-3236.36UPF0533 protein OS=Dictyostelium discoideum GN=DDB... [more]
CE044_XENTR1.472e-2937.61UPF0533 protein C5orf44 homolog OS=Xenopus tropica... [more]
CE044_DANRE1.472e-2938.07UPF0533 protein C5orf44 homolog OS=Danio rerio GN=... [more]
CE044_XENLA2.511e-2937.61UPF0533 protein C5orf44 homolog OS=Xenopus laevis ... [more]
CE044_PONAB5.594e-2936.61UPF0533 protein C5orf44 homolog OS=Pongo abelii PE... [more]
CE044_HUMAN5.594e-2936.61UPF0533 protein C5orf44 OS=Homo sapiens GN=C5orf44... [more]
CE044_BOVIN5.594e-2936.16UPF0533 protein C5orf44 homolog OS=Bos taurus PE=2... [more]
CE044_RAT7.305e-2936.16UPF0533 protein C5orf44 homolog OS=Rattus norvegic... [more]
CE044_MOUSE7.305e-2936.16UPF0533 protein C5orf44 homolog OS=Mus musculus PE... [more]
U533_DROME2.873e-2536.49UPF0533 protein CG4953 OS=Drosophila melanogaster ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H24_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189215 ID=CN189215; Name=CN189215; organism=Citrus sinensis; type=EST; length=728bp
GAGGCGTCAATTCATTCAGATTGAGTAAAGAGTGGTTGAGTGAGGGGACT
GAGGATGAGCTCGACGCCAGGAACACACTCGCTAGCCTTCAGAGTGATGA
GGCTATGTAGGCCGTCGTTACACGTGGAGCCTCCTCTTCGCGTAGACCCC
ACCGATCTCTTCATCGGCGAGGACATCTTCGACGATCCAATCGCCGCTTC
CAACCTCCCTCCACTAATATCTAGCGACGTCACCACCAACAAATCCTCCG
ATCTCACCTATCGCTCTAGATTCCTCCTCCACGACTCCGCTGATTCCATC
GGCCTCTCCGGCCTCCTCGTCCTCCCCCAAGCCTTCGGGGCTATTTATCT
GGGAGAGACGTTTTGTAGCTACATTAGTATCAACAACAGTTCCACTTTAG
AAGTTAGAGATGTTGTTATTAAGGCAGAAATTCAAACGGATAAGCAGAGG
ATCCTCCTTTTGGATACGTCAAAATCACCTGTTGAATCAATACGAGCGGG
CGGACGTTATGATTTCATCGTAGAACATGATGTCAAAGAACTCGGAGCTC
ATACGCTTGTGTGCACGGCATTGTATAGTGATGGTGAGGGAGAGCGGAAA
TATCTTCCACAGTTTTTCAAGTTCATTGTCTCCAATCCACTTTCAGTTCG
GACCAAGGTCCGTGTTGTTAAGGAAATAACATTTTTAGAGGCATGCATTG
AGAATCATACAAAATCAAACCTTTATAT
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