CN189210

Overview
NameCN189210
Unique NameCN189210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3988 contig Csv1_Contig3988:32..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.911e-36
Identity = 77/106 (72.64%), Postives = 85/106 (80.19%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FGMYDSLKPVVLT  +QD+F ASF LGW IT GAGLA YPIDTVRRRMMMT GEAVKYKSS+ AF +ILKNEG KSLFKG GANILR         G+D+LQ++FF
Sbjct:  268 FGMYDSLKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 373          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.911e-36
Identity = 77/106 (72.64%), Postives = 84/106 (79.25%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FGMYDSLKPV+LT  M+DSF ASF LGW IT GAGLA YPIDTVRRRMMMT GEAVKYKSS  AF +ILKNEGPKSLFKG GAN+LR         G+DKLQ++ F
Sbjct:  272 FGMYDSLKPVLLTGKMEDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFNQILKNEGPKSLFKGAGANVLRAVAGAGVLAGYDKLQVIVF 377          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 9.025e-36
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FG+YDS+KPVVLT  +QD+F ASF LGW IT GAGLA YPIDTVRRRMMMT GEAVKYKSSL AF +ILK EGPKSLFKG GANILR         G+D+LQ++FF
Sbjct:  273 FGLYDSIKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 378          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 9.025e-36
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FG+YDS+KPVVLT  +QD+F ASF LGW IT GAGLA YPIDTVRRRMMMT GEAVKYKSSL AF +ILK EGPKSLFKG GANILR         G+D+LQ++FF
Sbjct:  273 FGLYDSIKPVVLTGNLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 378          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.540e-35
Identity = 77/106 (72.64%), Postives = 84/106 (79.25%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FG+YDS+KPV+LT  +QDSF ASF LGW IT GAGLA YPIDTVRRRMMMT GEAVKYKSSL AF +ILKNEG KSLFKG GANILR         G+DKLQL+ F
Sbjct:  267 FGLYDSVKPVLLTGDLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIVF 372          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.626e-35
Identity = 77/104 (74.04%), Postives = 84/104 (80.77%), Query Frame = -2
Query:  272 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLV 583
            FGMYDSLKPV+LT  +QDSF ASF LGW IT GAGLA YPIDTVRRRMMMT GEAVKYKSSL AF +I+KNEGPKSLFKG GANILR         G+DKLQ++
Sbjct:  272 FGMYDSLKPVLLTGNLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVL 375          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.430e-35
Identity = 77/106 (72.64%), Postives = 84/106 (79.25%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FGMYDSLKPV+LT  MQDSF ASF+LGW IT GA LA YPIDTVRRRMMMT G+AVKYKSSL AF +ILKNEG KSLFKG G+NILR         G+DKLQL+ F
Sbjct:  272 FGMYDSLKPVLLTGSMQDSFFASFVLGWLITNGAALASYPIDTVRRRMMMTSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILRAIAGAGVLAGYDKLQLIVF 377          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 6.468e-34
Identity = 74/106 (69.81%), Postives = 82/106 (77.36%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FG+YDS+KPV+LT  +QDSF ASF LGW IT GAGLA YPIDTVRRRMMMT GEAVKYKSS  AF +I+K EG KSLFKG GANILR         G+DKLQL+ F
Sbjct:  271 FGLYDSVKPVLLTGDLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIVKKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVF 376          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.210e-33
Identity = 74/106 (69.81%), Postives = 82/106 (77.36%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FG+YDSLKPV+LT  +Q  F ASF LGW IT GAGLA YPIDTVRRRMMMT GEAVKYKSSL AF +ILK EG KSLFKG GANILR         G+D+LQ++FF
Sbjct:  217 FGLYDSLKPVLLTGTLQVCFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 322          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT_CHLRE (ADP,ATP carrier protein OS=Chlamydomonas reinhardtii GN=ABT PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.476e-33
Identity = 71/104 (68.27%), Postives = 81/104 (77.88%), Query Frame = -2
Query:  272 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLV 583
            FGMYDSLKPVVL   + ++FLA+FLLGWGITIGAGLA YPIDT+RRRMMMT G AVKY SS   F EI+KNEG KSLFKG GANILR         G+D+LQ++
Sbjct:  194 FGMYDSLKPVVLVGPLANNFLAAFLLGWGITIGAGLASYPIDTIRRRMMMTSGSAVKYNSSFHCFQEIVKNEGMKSLFKGAGANILRAVAGAGVLAGYDQLQVI 297          
The following BLAST results are available for this feature:
BLAST of CN189210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ADT_ORYSJ6.911e-3672.64ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_SOLTU6.911e-3672.64ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT2_MAIZE9.025e-3671.70ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT1_MAIZE9.025e-3671.70ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT1_ARATH1.540e-3572.64ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT1_SOLTU2.626e-3574.04ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT1_GOSHI3.430e-3572.64ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT2_ARATH6.468e-3469.81ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT1_WHEAT3.210e-3369.81ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]
ADT_CHLRE5.476e-3368.27ADP,ATP carrier protein OS=Chlamydomonas reinhardt... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189210 ID=CN189210; Name=CN189210; organism=Citrus sinensis; type=EST; length=584bp
TTTTTTTTTTTTTTTTTCCAAGGGAAAACTATTTAAATTATTACCCCAAC
CCTTGAGTCTAGGGCCCAAGCACAAAAACACTCAAATTCAAACAGTTCTT
TGACAACAAAAATCTTTTCTTTTATCAAATCCCTAAAAACCGGAAAAATA
TTAATAACCCTATCGATCATCCAAAATTATTCAAACTTGAAAAAAGCCCC
TATAGAATTTTCCCCAACATCTTGTACAAGTATTAACCGCCCCCCCCGGA
TCCGTATTTCTTGCCAAAAAAAACCAGCTGCAGCTTGTCAAAACCGGCAA
GCACACCAGCACCTGCCACAGCACGCAAAATGTTTGCCCCACCCCCTTTG
AAAAGGGATTTAGGGCCTTCATTCTTTAAAATTTCCGGGAAGGCAGGCAA
AGAGCTCTTGTACTTCACAGCTTCTCCAAAGGTCATCATCATCCTTCTAC
GCACCGTATCAATTGGGTAAAAAGCCAAACCAGCCCCAATTGTGATTCCC
CAGCCAAGTAAAAAGCTAGCCAAAAAACTATCCTGCATCCCATCAGTCAA
CACCACAGGTTTTAGAGAATCGTACATTCCAAAG
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