CN189169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.058e-35 Identity = 70/83 (84.34%), Postives = 76/83 (91.57%), Query Frame = -3 Query: 197 STEDDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 445 S+++D KTWD+EF+KVDQ TLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPE IRKTFNIK DF P+EEE V RENQWAFE Sbjct: 89 SSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.631e-32 Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = -3 Query: 197 STEDDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 445 +++DD K WDA+F+K+DQ TLF+LILAANYLNIK LLDLTCQTVADMIKGKTPE IR TFNIK DF P+EEE V RENQWAFE Sbjct: 78 TSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.879e-29 Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = -3 Query: 197 TEDDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 442 +E+D WD +F+ ++Q+T+F+LILAANYLNIK LLDLTCQTVADMIKGKTPE IR TFNI+ DF P+EEE V +ENQWAFE Sbjct: 71 SEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.094e-28 Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = -3 Query: 197 TEDDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 442 +E+D WD +F+ ++Q+T+F+LILAANYLNIK L DLTCQTVADMIKGKTPE IR TFNI+ DF P+EEE V +ENQWAFE Sbjct: 71 SEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 197 KDDKSTE---DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 457 +DD++ E DD WD EF+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPE IRKTFNIK DF +EE V +ENQW E Sbjct: 73 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 197 KDDKSTE---DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 457 +DD++ E DD WD EF+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPE IRKTFNIK DF +EE V +ENQW E Sbjct: 73 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 197 KDDKSTE---DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 457 +DD++ E DD WD EF+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPE IRKTFNIK DF +EE V +ENQW E Sbjct: 73 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 197 KDDKSTE---DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 457 +DD++ E DD WD EF+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPE IRKTFNIK DF +EE V +ENQW E Sbjct: 73 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 197 KDDKSTE---DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 457 +DD++ E DD WD EF+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPE IRKTFNIK DF +EE V +ENQW E Sbjct: 73 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 197 KDDKSTE---DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 457 +DD++ E DD WD EF+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPE IRKTFNIK DF +EE V +ENQW E Sbjct: 73 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162 The following BLAST results are available for this feature:
BLAST of CN189169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189169 ID=CN189169; Name=CN189169; organism=Citrus sinensis; type=EST; length=471bpback to top |