CN189160

Overview
NameCN189160
Unique NameCN189160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:139..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.070e-65
Identity = 116/145 (80.00%), Postives = 130/145 (89.66%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQRGL+GE+I RFEKKGF+LKGLKL++V+R FAEKHYEDLSSK FF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPA   PGTIRGD AI  GRN+IHGSDSVESA+KEIALWFPDGP+NWQSS+HPW+YE
Sbjct:    4 TFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.066e-65
Identity = 118/145 (81.38%), Postives = 129/145 (88.97%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+ APGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G  NW SSLHPWIYE
Sbjct:    4 TFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.442e-64
Identity = 117/145 (80.69%), Postives = 128/145 (88.28%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L++YI SGPVVAM+WEG+GVV TGR IIGATNP + APGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:    4 TFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.496e-64
Identity = 117/145 (80.69%), Postives = 126/145 (86.90%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQ GLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLSSKPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+ APGTIRGD AI  GRN+IHGSD+VESA+K I LWFP+G  NW SSLHPWIYE
Sbjct:    4 TFIMIKPDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESARKVIGLWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.871e-64
Identity = 116/145 (80.00%), Postives = 125/145 (86.21%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP    PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G +NWQSSLH WIYE
Sbjct:    4 TFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.002e-63
Identity = 115/145 (79.31%), Postives = 127/145 (87.59%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQRGLVGEII RFEKKGF+LKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+  PGTIRGD AI  GRN+IHGSD+VESA+KEI LWFP+G  NW SSLHPWIYE
Sbjct:    4 TFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.002e-63
Identity = 117/145 (80.69%), Postives = 126/145 (86.90%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQRGL+GEII RFEKKGF LKGLKL+TVDRPFAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQ  PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+GP N QSS H WIYE
Sbjct:    5 TFIMIKPDGVQRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGPANCQSSQHSWIYE 149
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.308e-63
Identity = 116/145 (80.00%), Postives = 128/145 (88.28%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVV+M+WEG+GV+ TGR IIGATNP + APGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:    4 TFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.231e-63
Identity = 114/145 (78.62%), Postives = 125/145 (86.21%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR +IGATNP    PGTIRGD AI  GRN+IHGSD+V+SA KEIALWFPDG ++WQSSLH WIYE
Sbjct:    4 TFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVDSATKEIALWFPDGVVHWQSSLHSWIYE 148
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.467e-62
Identity = 114/145 (78.62%), Postives = 124/145 (85.52%), Query Frame = -3 
Query:  227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 661
            TFIMIKPDGVQRGLVGEII RFEKKGF LKGLK + V+R FAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQ  PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G  NW+SSLH WIYE
Sbjct:    5 TFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFVNVERAFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGAANWESSLHSWIYE 149
The following BLAST results are available for this feature:
BLAST of CN189160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_ARATH1.070e-6580.00Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDKB_FLABI4.066e-6581.38Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK1_TOBAC3.442e-6480.69Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDKA_FLABI4.496e-6480.69Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK1_MESCR5.871e-6480.00Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK_HELAN1.002e-6379.31Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK1_SOYBN1.002e-6380.69Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDK_CAPAN1.308e-6380.00Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SPIOL2.231e-6378.62Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK1_PEA2.467e-6278.62Nucleoside diphosphate kinase 1 OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001G16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189160 ID=CN189160; Name=CN189160; organism=Citrus sinensis; type=EST; length=663bp
TTTTTTTTTTTTTTTTTCATAATACAGTCAACAAAAAAGCTTAAATATTG
TATATGGCAACCACAAAAATAAAAGCAGCCAACATAACCAGGATTGGTCT
CAATTTAACTCAATACTTCATAACAGTTCACCAACAAGGAGTAACCATAA
ATAAGGAAATAGGGATAGGGATAGGGATAAGTCTAACTGCAGGAACAATT
AGGCTCCTCAACCAAACATTAGTTTACTCATAAATCCAAGGGTGAAGGCT
GCTCTGCCAGTTAATAGGGCCATCAGGGAACCACAAGGCGATTTCTTTCT
GGGCACTCTCAACTGAGTCACTTCCATGGATAATATTCCTGCCCGTCACG
ATAGCCAAATCACCACGGATGGTTCCAGGAGCAAACTGCGCAGGGTTGGT
GGCTCCAATAATAGTGCGGCCAGTCTTAACAACACCTTCACCCTCCCAAA
TCATAGCAACAACAGGACCAGAGGTAATGTACTCAATCAAAGAACCAAAG
AAAGGCTTCGATGACAAATCCTCATAGTGCTTCTCAGCAAAAGGGCGGTC
CACAGTCATAAGCTTCAAACCCTTCAAAGAAAAACCCTTCTTCTCAAATC
TGATGATGATTTCACCAACAAGGCCTCTTTGGACCCCATCGGGCTTGATC
ATGATGAAAGTTT
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