CN189155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.597e-57 Identity = 109/139 (78.42%), Postives = 119/139 (85.61%), Query Frame = -2 Query: 307 ATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVIS-----VTENG-EGNESNRLMRYAAMFMSIRPHDHLE 705 ATS LEPGG+LGDELLSWCLRRPF+DRLP SSATFVC+E+IEAF L +++LRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQ AWRR R RTRG I V+EN EGN RL++YAAMFMSIRPHDHLE Sbjct: 588 ATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIGGSMSPVSENSIEGNSERRLLQYAAMFMSIRPHDHLE 726
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.244e-35 Identity = 72/136 (52.94%), Postives = 95/136 (69.85%), Query Frame = -2 Query: 319 VLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYR----------MRTRGPVISVTENGEGNESNRLMRYAAMFMSIRPH 696 +L PG F GDELLSWCLRRPF++RLP SS+T V +E+ EAFGLDA++++Y+T HFRY F NE++KR+ARYYS WRTWAAV +Q AWRRY+ +R R P+ GE ++L YAA+ S +P+ Sbjct: 556 MLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLGE----DKLRLYAAILTSPKPN 687
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18 Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = -2 Query: 343 LEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGEGNESNRLMRYAA 693 L PG F G+ELL+W L LP+S+ T +E +EAF L A +L+++ + FR + +++L+ T RYYS WRTWAA +Q AWRRY+ + +S+ E+ + + AA Sbjct: 544 LRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEVEAFALQAGDLKFVANQFR-RLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSLSLAESFSSYDEEEAVAVAA 659
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = -2 Query: 370 VLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGEGNE 696 +L PG F G+ELLSW L LP+S+ T + +EAF L A++L+++ + FR + +++L+ T R+YS +WRTWAA IQ AWRRY+ R ++ E+ E E Sbjct: 543 ILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQFR-RLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENNLTAIESMENEE 650
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16 Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = -2 Query: 379 VLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGE 696 +L+ G F G+ELL+W L LP+S+ T + +EAF L+A+ L+++ FR + + ++++T R+YS WRTWA+ IQ AWRRY R + + E E Sbjct: 564 LLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFR-RLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRKNAELRRIEEKEE 668
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = -2 Query: 373 SVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRY-RMRTRGPVISVTENGEGN 699 S+L+ G F G+ELL+W L LP+S+ T + +EAF L A L+++ FR + + +++ T R+YS WRTWAA+ IQ AWRRY + + + E GEG+ Sbjct: 574 SLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVASQFR-RLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRYVKKKKLEQLRKEEEEGEGS 682
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -2 Query: 385 TSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTEN 702 ++ L PG F G+ELL+W L LP+S+ + + +EAF L A++L+++ F+ + +++L+ RYYS WR W A +Q AWRRY+ R +S+ E+ Sbjct: 509 STTLRPGDFCGEELLTWALMPNSTLNLPSSTRSVRALSEVEAFALSAEDLKFVAHQFK-RLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYKRRKLAKELSLHES 613
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = -2 Query: 412 SVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTR 699 S+L+ G F GDELL+W L LP+S+ T + +EAF L A L+++ FR + + +++ T R+YS WRTWAA +Q AWRRY R + Sbjct: 575 SLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFR-RLHSRQVQHTFRFYSQQWRTWAACFMQAAWRRYIKRKK 669
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = -2 Query: 418 VLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 696 +L+ G F G+ELL+W L LP+S+ T + +EAF L+A+ L+++ FR + + ++++T R+YS WRTWAA IQ AWRR+ R Sbjct: 570 LLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFR-RLHSRQVQQTFRFYSQQWRTWAACFIQAAWRRHLRR 661
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 39/96 (40.62%), Postives = 59/96 (61.46%), Query Frame = -2 Query: 412 SVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTR 699 S+L+ G F G+ELL+W L LP+S+ T + +EAF L ++ L+++ FR + + +++ T R+YS WRTWAA IQ AWRRY R + Sbjct: 559 SLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFVASQFR-RLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKK 653 The following BLAST results are available for this feature:
BLAST of CN189155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189155 ID=CN189155; Name=CN189155; organism=Citrus sinensis; type=EST; length=706bpback to top |