CN189146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189146 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 1.982e-19 Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = -2 Query: 196 AALGEANEDAIQSGNFYGKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQY 354 AALG+AN DAI G FYGK AQQ+N+PVPEGCTDP AENFDPTARSDDG+C Y Sbjct: 420 AALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472
BLAST of CN189146 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.862e-18 Identity = 41/55 (74.55%), Postives = 49/55 (89.09%), Query Frame = -2 Query: 193 AALGEANEDAIQSGNFYGKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQYT 354 AALG+AN DA+++G+FYG+ AQQ N+PVPEGCTDP A+NFDPTARSDDGSC YT Sbjct: 411 AALGDANSDAMKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465
BLAST of CN189146 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.738e-18 Identity = 39/54 (72.22%), Postives = 48/54 (88.89%), Query Frame = -2 Query: 193 AALGEANEDAIQSGNFYGKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYT 354 AALG+AN+DA+++G+FYGK AQQ +PVPEGCTD A+N+DPTARSDDGSC YT Sbjct: 410 AALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463
BLAST of CN189146 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.883e-18 Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = -2 Query: 190 AALGEANEDAIQSGNFYGKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYTL 354 AALG+AN+DAI G F+GKAAQQ+++PV +GCTDP A+N+DPTARSDDGSC Y L Sbjct: 418 AALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of CN189146 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.203e-16 Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = -2 Query: 196 AALGEANEDAIQSGNFYG-KAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQY 354 AALG+AN DAI+ G FYG +AAQQ+ NVPVPEGCTDP A N+DPTARSDDGSC Y Sbjct: 420 AALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474 The following BLAST results are available for this feature:
BLAST of CN189146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189146 ID=CN189146; Name=CN189146; organism=Citrus sinensis; type=EST; length=355bpback to top |