CN189095

Overview
NameCN189095
Unique NameCN189095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:1133..1740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.562e-73
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = -3
Query:  209 FWDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 607
            FWDKYRKAPEGTPRKAEAQKQFFEAM HRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMR LANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  362 FWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.271e-55
Identity = 96/133 (72.18%), Postives = 113/133 (84.96%), Query Frame = -3
Query:  209 FWDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 607
            FWDK+RKAPEG+P+K EA+KQ  E M HRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMKHMR  AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  352 FWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.344e-53
Identity = 92/133 (69.17%), Postives = 112/133 (84.21%), Query Frame = -3
Query:  209 FWDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 607
            FW+KYRKAPEG+ RK EAQKQ  EAM HR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+KHMR  ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  362 FWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.223e-53
Identity = 94/133 (70.68%), Postives = 113/133 (84.96%), Query Frame = -3
Query:  209 FWDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 607
            FW+K+RKAPEG+ +K EA+KQ  EAM HR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMKHMR  ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  361 FWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.204e-49
Identity = 92/133 (69.17%), Postives = 108/133 (81.20%), Query Frame = -3
Query:  209 FWDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 607
            FW KY+KAPEG+ RK EAQKQ  EAM HR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMR +AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  347 FWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.429e-34
Identity = 67/132 (50.76%), Postives = 89/132 (67.42%), Query Frame = -3
Query:  209 WDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 604
            W  Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR  ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  366 WQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.841e-33
Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = -3
Query:  209 WDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 604
            W  Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR  ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  364 WQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.339e-31
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = -3
Query:  209 WDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 604
            W  Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR  ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  362 WQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.135e-30
Identity = 61/132 (46.21%), Postives = 84/132 (63.64%), Query Frame = -3
Query:  209 WDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 604
            W  Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR   N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  344 WQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CN189095 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 4.757e-30
Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = -3
Query:  260 WDKYRKAPEGTPRKAEAQKQFFEAMFHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQAC 604
            W  YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR  AN+CN G+ KE M EAS  AC
Sbjct:  355 WHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
The following BLAST results are available for this feature:
BLAST of CN189095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI1.562e-7398.50Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU3.271e-5572.18Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH2.344e-5369.17Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA5.223e-5370.68Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEA_ARATH1.204e-4969.17Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.429e-3450.76Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN7.841e-3348.48Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU7.339e-3146.97Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
LEGU_CANEN2.135e-3046.21Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH4.757e-3053.04Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E24_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189095 ID=CN189095; Name=CN189095; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTTGGGCAGGGAAGAGCTTTTAAATATAATAATTAC
AAGGAAGCAATCACCAGCCAAATGAAAATAGACATTGCCATAAATGGAAG
CAATCATCAGCCAAATGAAAATAGATATTGCCATATTGGCGACTATAATG
AAAACTAACATATTTCAAGAACTGGCTTATGATATTCGCACAGTTCTCGG
CTTCTTTATGCACTGAATCCTTTGTCGAGAGAACTCCAAGGACCAGAAGG
AATATTTTCACAGGCTTGTGCTGATGCTTCCGCCATCTTCTCTTTCCCAA
TTCCTGTATTACAGATGTTTGCAAGAAAACGCATGTGCTTCATTCCATAT
TGCGATAGAGCTCCACAGTGCGACTCAAAAGTCCTCACCAGTGATTTGAG
GCAGCCCCAGTCATCAACAAGAGGCTGACCAGCAGGTCGAACAGTGTTCA
AGATCTCTGGACCTTTCTCAATTCCAAATAAGAGCTTTCCAATAAGTTTG
ATGCTGTGGTCTACATGCATTCTATGAAACATTGCTTCAAAAAACTGCTT
CTGAGCTTCAGCCTTCCTAGGAGTGCCCTCAGGTGCCTTGCGGTACTTGT
CCCAAAAAT
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