CN189071

Overview
NameCN189071
Unique NameCN189071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length293
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8206 contig Csv1_Contig8206:86..378. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN189071 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.683e-32
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 3 
Query:   24 MASISQTNPFPCKTLTQNPPLNPFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTQAADDDEWGPQ 242
            MASISQTN FPCKTL+QNPP N FTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLT+AADDDEWGP+
Sbjct:    1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDEWGPE 73
The following BLAST results are available for this feature:
BLAST of CN189071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAP_CITUN2.683e-3291.78Plastid-lipid-associated protein, chloroplastic OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189071 ID=CN189071; Name=CN189071; organism=Citrus sinensis; type=EST; length=293bp
ACTGCGTGGTTTTGGAATAGCAAATGGCTTCAATATCTCAAACCAACCCG
TTCCCGTGCAAGACTCTTACACAAAACCCACCACTCAATCCTTTCACCTC
TAAACCTTCAATTCTTCCTTTGAACTCGGTTCGAATTTCACGGAGTCTCG
CCAAGAAATCATTTCTTTCAATCCAAGGATTCACTCGGGCCAGGCCGCTG
GTTCTAACTCAGGCTGCCGATGATGATGAGTGGGGCCCGCAGAAAGAGAA
GGAGGAAGGTGGCGCTCTGGCGGTGGCAGAGGAGGAGAGCCCA
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