CN189069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_PYRSA (Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 1.186e-76 Identity = 127/177 (71.75%), Postives = 150/177 (84.75%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGS 679 G R L LV+PF+ LPEV SA +KIP EK+++T I +F++LVC Q+PLYGI +T +DPFYWMRVILASN+GT+MELGI+PIVTSGLVMQLLAGSKII+VD +ED+ L GAQKLLGILI IGE+VAYV+SGMYG V LGAGNAILII+QL +GIIVICLDELLQKGYG+GS Sbjct: 5 GVRFLTLVKPFMFALPEVSSATKKIPVNEKLLWTSIVVFLYLVCCQIPLYGITNTKSSDPFYWMRVILASNKGTLMELGISPIVTSGLVMQLLAGSKIIDVDQGTKEDKTLFQGAQKLLGILITIGESVAYVLSGMYGDVKDLGAGNAILIIVQLFTSGIIVICLDELLQKGYGIGS 181 HSP 2 Score: 53.5286 bits (127), Expect = 1.186e-76 Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 3 Query: 684 ISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 ISLFIA N+CESI+WK+FSPTTIN+G G+ G Sbjct: 183 ISLFIATNVCESIVWKSFSPTTINTGRGTEFEG 215
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_DICDI (Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.407e-74 Identity = 120/178 (67.42%), Postives = 146/178 (82.02%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 GFR L +V+PF +PEV DRKIPFREKV++T I LFIFLVCSQ+PLYGI ST +DPFYW +VI+ASNRGT+MELGI+PIVTSG+VMQLLAG+K+IE+D +V+ DR L + AQKL G+LI +G+ VAY+ SG YG + LG GN LI+LQL FAGIIV+ LDELLQKGYG+GSG Sbjct: 2 GFRFLDIVKPFTSLVPEVGQPDRKIPFREKVLWTAICLFIFLVCSQIPLYGIRSTDSSDPFYWAKVIMASNRGTLMELGISPIVTSGMVMQLLAGAKLIEIDQSVKADRDLFSAAQKLFGMLICVGQGVAYIWSGSYGDPAVLGFGNCFLIVLQLFFAGIIVMLLDELLQKGYGIGSG 179 HSP 2 Score: 51.6026 bits (122), Expect = 2.407e-74 Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WK FSPTT++ G G+ G Sbjct: 179 GISLFIATNICETIVWKTFSPTTVSVGKGTEFEG 212
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_HARAN (Protein transport protein Sec61 subunit alpha OS=Harpagifer antarcticus GN=sec61a PE=2 SV=3) HSP 1 Score: 244.973 bits (624), Expect = 2.407e-74 Identity = 120/178 (67.42%), Postives = 149/178 (83.71%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSG Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.8398 bits (133), Expect = 2.407e-74 Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G+ G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_DISMA (Protein transport protein Sec61 subunit alpha OS=Dissostichus mawsoni GN=sec61a PE=2 SV=3) HSP 1 Score: 244.973 bits (624), Expect = 2.407e-74 Identity = 120/178 (67.42%), Postives = 149/178 (83.71%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSG Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.8398 bits (133), Expect = 2.407e-74 Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G+ G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_PAGBO (Protein transport protein Sec61 subunit alpha OS=Pagothenia borchgrevinki GN=sec61a PE=2 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 3.139e-74 Identity = 120/178 (67.42%), Postives = 148/178 (83.15%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 G + L ++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSG Sbjct: 2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.8398 bits (133), Expect = 3.139e-74 Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G+ G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_NOTAN (Protein transport protein Sec61 subunit alpha OS=Notothenia angustata GN=sec61a PE=2 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 3.139e-74 Identity = 120/178 (67.42%), Postives = 148/178 (83.15%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 G + L ++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSG Sbjct: 2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.8398 bits (133), Expect = 3.139e-74 Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G+ G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A2_ONCMY (Protein transport protein Sec61 subunit alpha isoform B OS=Oncorhynchus mykiss GN=sec61ab PE=2 SV=3) HSP 1 Score: 244.202 bits (622), Expect = 4.094e-74 Identity = 120/178 (67.42%), Postives = 148/178 (83.15%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S +GAG +LII+QL AG+IV+ LDELLQKGYGLGSG Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSDMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 55.8398 bits (133), Expect = 4.094e-74 Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTT+N+G G+ G Sbjct: 178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A2_MOUSE (Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus GN=Sec61a2 PE=2 SV=3) HSP 1 Score: 243.817 bits (621), Expect = 4.094e-74 Identity = 119/178 (66.85%), Postives = 149/178 (83.71%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG +++GAG +LII+QL AG+IV+ LDELLQKGYGLGSG Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 56.225 bits (134), Expect = 4.094e-74 Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTTIN+G G+ G Sbjct: 178 GISLFIATNICETIVWKAFSPTTINTGRGTEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A2_HUMAN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2 PE=2 SV=3) HSP 1 Score: 243.817 bits (621), Expect = 4.094e-74 Identity = 119/178 (66.85%), Postives = 149/178 (83.71%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG +++GAG +LII+QL AG+IV+ LDELLQKGYGLGSG Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 56.225 bits (134), Expect = 4.094e-74 Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTTIN+G G+ G Sbjct: 178 GISLFIATNICETIVWKAFSPTTINTGRGTEFEG 211
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A2_BOVIN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Bos taurus GN=SEC61A2 PE=2 SV=3) HSP 1 Score: 243.817 bits (621), Expect = 4.094e-74 Identity = 119/178 (66.85%), Postives = 149/178 (83.71%), Query Frame = 2 Query: 149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG +++GAG +LII+QL AG+IV+ LDELLQKGYGLGSG Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178 HSP 2 Score: 56.225 bits (134), Expect = 4.094e-74 Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782 GISLFIA NICE+I+WKAFSPTTIN+G G+ G Sbjct: 178 GISLFIATNICETIVWKAFSPTTINTGRGTEFEG 211 The following BLAST results are available for this feature:
BLAST of CN189069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189069 ID=CN189069; Name=CN189069; organism=Citrus sinensis; type=EST; length=798bpback to top |