CN189064

Overview
NameCN189064
Unique NameCN189064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9355 contig Csv1_Contig9355:102..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN189064 vs. ExPASy Swiss-Prot
Match: APY_SOLTU (Apyrase OS=Solanum tuberosum GN=RROP1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.487e-27
Identity = 54/107 (50.47%), Postives = 78/107 (72.90%), Query Frame = -2 
Query:  253 FFFDRAAEAGFIDQNEPVAKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNLPYICMDLVYQHALLVVGFGLDPWQEITLVKQIKYQNSLVEAAWPLGSAIEAISS 573
            FF+D  A+ G +D   P A  +P  + +AAK ACQT + D KSI+P+  + N+PY+CMDL+Y++ LLV GFGL+P +EIT++  ++Y+N LV AAWPLG AI+ +SS
Sbjct:  338 FFYDIGAQVGIVDTKFPSALAKPIQYLNAAKVACQTNVADIKSIFPKTQDRNIPYLCMDLIYEYTLLVDGFGLNPHKEITVIHDVQYKNYLVGAAWPLGCAIDLVSS 444
[Close]
BLAST of CN189064 vs. ExPASy Swiss-Prot
Match: NTPA_PEA (Nucleoside-triphosphatase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = -2 
Query:  250 FFDRAAEAGFIDQNEPVAKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNLP-YICMDLVYQHALLVVGFGLDPWQEITLVKQIKYQNSLVEAAWPLGSAIEAISSL 570
            FF    + G +D + P   +RP D E+ AK AC    EDAKS YP +D+ N+  Y+CMDL+YQ+ LLV GFGLDP Q+IT  K+I+YQ+++VEAAWPLG+A+EAIS+L
Sbjct:  338 FFYLPEDTGMVDASTPNFILRPVDIETKAKEACALNFEDAKSTYPFLDKKNVASYVCMDLIYQYVLLVDGFGLDPLQKITSGKEIEYQDAIVEAAWPLGNAVEAISAL 445
The following BLAST results are available for this feature:
BLAST of CN189064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
APY_SOLTU1.487e-2750.47Apyrase OS=Solanum tuberosum GN=RROP1 PE=1 SV=2[more]
NTPA_PEA3.313e-2754.63Nucleoside-triphosphatase OS=Pisum sativum PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E05_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189064 ID=CN189064; Name=CN189064; organism=Citrus sinensis; type=EST; length=574bp
TTTTATCAAACACTCGACAATTATAATCAGAACATTTTGTAACGTGATTA
CAAATGATAATAAATGGAACTAATATTCCCCCCCGGCGTTATTCCCAAGA
TATATAGACCAAATTCAATTCCCAATCCAGGTTGATACTGATTCTGAGGC
CACCGGCCGTGGATACTTCAGCTTCAAATCCGCAGACACCCAAAAACCAC
ACATTGCTGAAGTTTAGATGAATAATTATGCGGAAACCTGATTCAATCCT
AAAGATGAGATGGCCTCTATGGCACTGCCTAGTGGCCATGCTGCTTCGAC
AAGTGAATTTTGATATTTAATTTGCTTTACTAAGGTAATCTCTTGCCAGG
GATCAAGGCCAAATCCGACTACAAGCAATGCATGCTGGTAGACAAGATCC
ATGCATATGTACGGCAGATTGCTCTCATCCACACGTGGATATATGGATTT
TGCGTCCTCAAGTTTAGTTTGGCAGGCACGCTTAGCTGCAGACTCAAAAT
CACCAGGACGAACTTTGGCAACGGGTTCATTTTGGTCAATAAAACCAGCC
TCGGCAGCCCTGTCAAAGAAAAAT
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