CN189054

Overview
NameCN189054
Unique NameCN189054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig567 contig Csv1_Contig567:62..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.556e-23
Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = -1
Query:  264 MVTLGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 548
            M  LGG R+V    N+ EI +LARFAV+EHNKKQN+ L+F           SGTLY ITL+A +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:    1 MAALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.268e-22
Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = -1
Query:  249 MVTLGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA 548
            M  +GGV +V A  N+ E+ +LARFAVDEHNKK+N+ L+F           +GTL+ +TL+ +E GQKKL+EAKVW KPW+ FKEL+EF P + + + T+
Sbjct:   34 MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.645e-20
Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = -1
Query:  282 TQKTMVTLGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEF 560
            T+KTM+ LGGV ++    N+ EI +LARFA+ EHNK+QN  L+F           +GT+Y +TL+A EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   29 TEKTMM-LGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20
Identity = 51/92 (55.43%), Postives = 60/92 (65.22%), Query Frame = -1
Query:  264 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 539
            LGGV  V    N+  +V+LARFAV EHNKK NS L+F           +GTLY  T++  EG  KKL+EAKVWEKPWM FKEL+EF PV  S
Sbjct:   47 LGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19
Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = -1
Query:  252 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSST 539
            LGG  +  + AN+ E   LARFAVDEHNK++N+ L+F           +GTL+ +TL+A+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   48 LGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = -1
Query:  255 RLTQKTMVT------LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSS 566
            R TQK  V        GG+++V A  N+ ++  LARFAV+EHN+K N+ L F           +GT+Y +T++  +G  KKL+EAKVWEKPW  FK+L+EF PV +  S+
Sbjct:   26 RSTQKESVADNAGMLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.605e-17
Identity = 44/75 (58.67%), Postives = 51/75 (68.00%), Query Frame = -1
Query:  273 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPV 497
            EI  LARFAVDEHNKKQN+ L+F           +G +Y ITL+A  GG KK +EAKVW KPW  FKEL+EF PV
Sbjct:    3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.317e-16
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = -1
Query:  270 VTLGGVRNVEATANNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVA 545
            V LGGV++  A   N  E + LARFAV EHN K N+ L+F           +G ++  T++  EGG KKL+EAKVWEK W  FK+L+EF P A
Sbjct:   15 VLLGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107          
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.502e-15
Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = -1
Query:  279 QKTMVTLGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFN 557
            Q+    +GGVR+++A AN+ ++ +LARFAVDEHNK +N  L++           +GT++ +T++  +G   K++EAKV EK W   K+L+ FN
Sbjct:    4 QQAGTIVGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFN 96          
BLAST of CN189054 vs. ExPASy Swiss-Prot
Match: CYTM_SOLTU (Multicystatin OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = -1
Query:  282 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEF 539
            LGG+ NV    NN E  +LARFAV ++NKK+N++L+F           +G LY ITL A++ G+KK++EAK+W K W  FK++ EF
Sbjct:  476 LGGIINVPFP-NNPEFQDLARFAVQDYNKKENAHLEFVENLNVKEQLVAGMLYYITLVAIDAGKKKIYEAKIWVKEWENFKKVIEF 560          

HSP 2 Score: 78.1814 bits (191), Expect = 3.699e-14
Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = -1
Query:  240 RLTQKTMVTLGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA*LV 566
            +L    +  LGG+ +V    NN E  +LARFA+  +NKK+N +L+F           +G +Y ITL A++ G+KK++E K+W K W  FK++ EF  V    + T  ++
Sbjct:  184 KLVGDDIAKLGGITDVPFP-NNPEFQDLARFAIQVYNKKENVHLEFVENLNVKQQVVAGMMYYITLAAIDAGKKKIYETKIWVKEWEDFKKVVEFKLVGDDSAKTGGII 291          

HSP 3 Score: 75.8702 bits (185), Expect = 1.836e-13
Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = -1
Query:  237 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA*LVV 539
            +GG  +V    NN E  +LARFAV ++NKK+N++L++           +G +Y ITL A + G+KK++EAK+W K W  FK++ EF  V    +    +++
Sbjct:  570 IGGFTDVPFP-NNPEFQDLARFAVQDYNKKENAHLEYVENLNVKEQLVAGMIYYITLVATDAGKKKIYEAKIWVKEWEDFKKVVEFKLVGDDSAKPGGIII 669          

HSP 4 Score: 71.633 bits (174), Expect = 3.462e-12
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = -1
Query:  273 GGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAV-EGGQKKLFEAKVWEKPWMQFKELKEFNPV 536
            GG+ NV    NN +   LARFA+ ++NKKQN++L+F           +G +Y ITL A  + G+KK+++AK+W K W  FK++ EF  V
Sbjct:   99 GGIVNVP-NPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFKKVVEFKLV 186          

HSP 5 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = -1
Query:  273 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPV 539
            LGG   V    N+ E  +L RFAV ++NK QN++L+F           +G LY IT  A +GG+KK++E K+W K W  FK++ EF  V
Sbjct:  382 LGGFTEVPFP-NSPEFQDLTRFAVHQYNKDQNAHLEFVENLNVKKQVVAGMLYYITFAATDGGKKKIYETKIWVKVWENFKKVVEFKLV 469          

HSP 6 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = -1
Query:  273 GGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLQAVEGGQKKLFEAKVWEKPWMQFKELKEFNPV 536
            GG+ NV    N+ E  +LARFAV ++N  QN++L+F           SG +Y ITL A + G KK +EAK+W K W  FK++ +F  V
Sbjct:  288 GGIINVP-NPNSPEFQDLARFAVQDYNNTQNAHLEFVENLNVKEQLVSGMMYYITLAATDAGNKKEYEAKIWVKEWEDFKKVIDFKLV 374          
The following BLAST results are available for this feature:
BLAST of CN189054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTI_VIGUN2.556e-2356.84Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH1.268e-2250.00Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT3_ARATH2.645e-2052.69Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT1_ORYSJ7.696e-2055.43Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT12_ORYSJ2.924e-1946.88Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT1_MAIZE8.508e-1943.64Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYTA_HELAN1.605e-1758.67Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYT1_HORVU2.317e-1647.31Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT1_ARATH1.502e-1539.78Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]
CYTM_SOLTU7.454e-1546.51Multicystatin OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189054 ID=CN189054; Name=CN189054; organism=Citrus sinensis; type=EST; length=611bp
GAGGTATATATTAAACACCAAAGGTCATTTCAATTATTTTTCACACAGTT
ATAAAAGTTGCGCTGAGTTGCAGCTACTACCATAAATAATCGACACATAA
CTTGCAAAAGATTAAAGAACCAAACTCATAAGTCCGGTTACATTTATTTT
TATAATCTGAACATGGTTATAGCTCCATTCTTATTGATACTGTCTCTTTG
TTTGATCCATTGCAAGCTACAGATGTCATCTTCAGTCACCACAAGCTAAG
CGGTTGAGGAGTGAGACTGAGCAACAGGATTGAATTCTTTCAACTCCTTG
AATTGCATCCAAGGCTTCTCCCAGACCTTAGCTTCAAAAAGTTTCTTCTG
ACCTCCTTCAACAGCCTGCAAGGTGATGTCGTACAGAGTCCCTGAAACCA
CTTGCTGCTTCGCACTTACAACTTTTACAAATTGCAGATTTGAATTCTGC
TTCTTGTTATGCTCATCCACAGCGAAGCGTGCGAGATTAACGATCTCCTG
ATTGTTGGCTGTTGCTTCAACGTTACGAACACCGCCCAATGTAACCATTG
TTTTCTGCGTAAGTCTGATGATAAAGCGATGAGATTTGAATATAAACACG
GTCACTTGGCA
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