CN189038

Overview
NameCN189038
Unique NameCN189038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12501 contig Csv1_Contig12501:1233..1970. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: PMGI_MESCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.242e-76
Identity = 140/170 (82.35%), Postives = 158/170 (92.94%), Query Frame = -3
Query:  230 VEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 736
            VEIPSDSGITFNVQPKMKALEIAE+A+ AILS +F QVRVNLPNSDMVGHTGDIEATVVACKAADEAVK+IIDAIE+VGGIY++TADHGNAEDMVKR+K G+P + K+GNIQ+LTSHTL+PVPIAIGGPGL   V+FR D+P GGLANVAAT +NLHG+EAPSDYEP+LI
Sbjct:  385 VEIPSDSGITFNVQPKMKALEIAEKARDAILSGKFDQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKMIIDAIEQVGGIYVITADHGNAEDMVKRDKKGQPAMDKNGNIQILTSHTLEPVPIAIGGPGLTPGVRFRNDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 554          
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: PMGI_PRUDU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.046e-75
Identity = 140/170 (82.35%), Postives = 157/170 (92.35%), Query Frame = -3
Query:  230 VEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 736
            VEIPSDSGITFNVQPKMKA+EIAE+ + AILS++F QVRVNLPNSDMVGHT  IEATVVACKAADEAVKIIIDAIE+VGGIY+VTADHGNAEDMVKRNK G+PLL K+GNIQ+LTSHTL+PVPIAIGGPGL   V+FR D+PNGGLANVAAT +NLHG+EAP+DYE +LI
Sbjct:  314 VEIPSDSGITFNVQPKMKAVEIAEKGRGAILSKKFEQVRVNLPNSDMVGHTSSIEATVVACKAADEAVKIIIDAIEQVGGIYVVTADHGNAEDMVKRNKKGQPLLDKNGNIQILTSHTLQPVPIAIGGPGLAPGVQFRKDVPNGGLANVAATVMNLHGFEAPADYETTLI 483          
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: PMGI_TOBAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.622e-74
Identity = 139/170 (81.76%), Postives = 154/170 (90.59%), Query Frame = -3
Query:  230 VEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 736
            VEIPSDSGITFNV+PKMKALEIAER + AILS +F QVRVNLPN DMVGHTGDI+AT+ ACK+ADEAVK+I++AIE+VGGIYLVTADHGNAEDMVKRNK GEP L K+GNIQ+LTSHT +PVPIAIGGPGL   V+FR DLP GGLANVAATF+NLHG EAPSDYEPSLI
Sbjct:  385 VEIPSDSGITFNVKPKMKALEIAERTRDAILSGKFDQVRVNLPNGDMVGHTGDIKATIEACKSADEAVKMILEAIEQVGGIYLVTADHGNAEDMVKRNKKGEPALDKNGNIQILTSHTCEPVPIAIGGPGLAPGVRFRQDLPTGGLANVAATFMNLHGSEAPSDYEPSLI 554          
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: PMGI_RICCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.302e-73
Identity = 135/170 (79.41%), Postives = 155/170 (91.18%), Query Frame = -3
Query:  230 VEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 736
            VEIPSD GITFNVQPKMKA+EIAE+A+ AILS +F QVRVN+PN DMVGHTGD+EATVV CKAADEAVK+IIDAIE+VGGIY+VTADHGNAEDMVKR+KSG+P+  K G IQ+LTSHTL+PVPIAIGGPGL   V+FR+D+P GGLANVAAT +NLHG+EAPSDYEP+LI
Sbjct:  382 VEIPSDVGITFNVQPKMKAIEIAEKARDAILSGKFQQVRVNIPNGDMVGHTGDVEATVVGCKAADEAVKMIIDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPMADKSGKIQILTSHTLQPVPIAIGGPGLTPGVRFRSDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 551          
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: PMGI_MAIZE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.591e-71
Identity = 134/170 (78.82%), Postives = 152/170 (89.41%), Query Frame = -3
Query:  230 VEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 736
            VE+PSDSGITFNV P MKALEIAE+A+ A+LS +F QVRVNLPN DMVGHTGDIEATVVACKAADEAVKII+DA+E+VGGIYLVTADHGNAEDMVKRNKSG+PLL K+  IQ+LTSHTL+PVP+AIGGPGL   VKFR D+   GLANVAAT +NLHG+EAP+DYE +LI
Sbjct:  385 VEVPSDSGITFNVAPNMKALEIAEKARDALLSGKFDQVRVNLPNGDMVGHTGDIEATVVACKAADEAVKIILDAVEQVGGIYLVTADHGNAEDMVKRNKSGKPLLDKNDRIQILTSHTLQPVPVAIGGPGLHPGVKFRNDIQTPGLANVAATVMNLHGFEAPADYEQTLI 554          
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: PMG2_ARATH (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Arabidopsis thaliana GN=At3g08590 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.031e-70
Identity = 134/170 (78.82%), Postives = 152/170 (89.41%), Query Frame = -3
Query:  230 VEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 736
            VEIPSDSGI+FNVQPKMKALEIAE+A+ AILS +F QVRVNLPN DMVGHTGDIEATVVAC+AAD AV+ I+DAIE+VGGIY+VTADHGNAEDMVKR+KSG+P L K+GN+Q+LTSHTLKPVPIAIGGPGL   V+FR D+   GLANVAAT +NLHG+ APSDYE SLI
Sbjct:  386 VEIPSDSGISFNVQPKMKALEIAEKARDAILSGKFDQVRVNLPNGDMVGHTGDIEATVVACEAADRAVRTILDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPALDKEGNLQILTSHTLKPVPIAIGGPGLSAGVRFRQDIETPGLANVAATVMNLHGFVAPSDYETSLI 555          
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: PMG1_ARATH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Arabidopsis thaliana GN=PGM1 PE=2 SV=3)

HSP 1 Score: 262.307 bits (669), Expect = 1.945e-69
Identity = 132/170 (77.65%), Postives = 150/170 (88.24%), Query Frame = -3
Query:  230 VEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 736
            VEIPSDSGI+FNVQPKMKALEI E+A+ AILS +F QVRVN+PN DMVGHTGDIEATVVAC+AAD AVK+I DAIE+V GIY+VTADHGNAEDMVKR+KSG+P L K+G +Q+LTSHTLKPVPIAIGGPGL   V+FR DL   GLANVAAT +NLHG+ APSDYEP+LI
Sbjct:  384 VEIPSDSGISFNVQPKMKALEIGEKARDAILSGKFDQVRVNIPNGDMVGHTGDIEATVVACEAADLAVKMIFDAIEQVKGIYVVTADHGNAEDMVKRDKSGKPALDKEGKLQILTSHTLKPVPIAIGGPGLAQGVRFRKDLETPGLANVAATVMNLHGFVAPSDYEPTLI 553          
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIN (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29
Identity = 81/170 (47.65%), Postives = 104/170 (61.18%), Query Frame = -3
Query:  230 EIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKD--GNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 733
            EI SD  I F+  P+MKAL I E  +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGNA++M + +K G  + KD  GN    TSHTL PVPI+I  P   + ++F + L N GLANVAAT +++ GYE P  Y PSLI
Sbjct:  383 EILSDV-IPFDQSPEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29
Identity = 81/170 (47.65%), Postives = 104/170 (61.18%), Query Frame = -3
Query:  230 EIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKD--GNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 733
            EI SD  I F+  P+MKAL I E  +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGNA++M + +K G  + KD  GN    TSHTL PVPI+I  P   + ++F + L N GLANVAAT +++ GYE P  Y PSLI
Sbjct:  383 EILSDV-IPFDQSPEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of CN189038 vs. ExPASy Swiss-Prot
Match: GPMI_PSEP1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.130e-23
Identity = 69/159 (43.40%), Postives = 87/159 (54.72%), Query Frame = -3
Query:  254 IPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 730
            IPS    T+++QP+M A E+ +R  +AI  +RF  + VN  N DMVGHTG  EA V A +A D  V  I+DA+EKVGG  L+TADHGN E M                Q  T+HT +PVP    G     +VK R     G LA+VA T + L G E P
Sbjct:  357 IPSPKVATYDLQPEMSAPEVTDRIVEAIEQQRFDVIVVNYANGDMVGHTGVFEAAVKAVEALDTCVGRIVDALEKVGGEALITADHGNVEQMEDECTG----------QAHTAHTTEPVPFIYVG---KRNVKVR---EGGVLADVAPTMLKLLGLEKP 499          
The following BLAST results are available for this feature:
BLAST of CN189038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
PMGI_MESCR6.242e-7682.352,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_PRUDU4.046e-7582.352,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_TOBAC2.622e-7481.762,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_RICCO1.302e-7379.412,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_MAIZE1.591e-7178.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG2_ARATH1.031e-7078.82Probable 2,3-bisphosphoglycerate-independent phosp... [more]
PMG1_ARATH1.945e-6977.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEPIN5.725e-2947.65Probable 2,3-bisphosphoglycerate-independent phosp... [more]
GPMI_LEPIC5.725e-2947.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEP16.130e-2343.402,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D14_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189038 ID=CN189038; Name=CN189038; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTTTTTTTTTAAATAAATTTTGAGCTATATTGTTCTGTCTGCCT
CCAACAGACAGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAA
ATGAATTCAAGACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAA
TTCCTCCGGAGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCG
TCAGTTACTTCTCAGTCGTCAGTTACTTCAATAAGACTTGGCTCGTAGTC
ACTAGGCGCCTCATATCCATGGAGATTGATAAAAGTTGCTGCTACATTGG
CCAGCCCACCATTAGGGAGATCTGTGCGGAACTTGACATCATCTGGCAGT
CCAGGACCTCCGATTGCAATGGGAACGGGTTTAAGAGTGTGAGACGTGAG
CACTTGAATATTGCCATCCTTAAGAAGAGGCTCCCCAGATTTGTTCCTCT
TGACCATGTCCTCAGCATTGCCATGATCTGCAGTAACAAGATATATTCCA
CCAACTTTCTCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGC
CTTGCATGCCACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGT
CACTATTTGGTAGGTTAACACGCACCTGGTGGAACCTGCGACTAAGGATG
GCCTTCTTTGCCCTTTCAGCAATCTCCAAAGCCTTCATCTTGGGCTGTAC
ATTGAAAGTAATTCCAGAATCACTAGGAATTTCCACAT
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