CN189036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP1_MAIZE (Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.552e-41 Identity = 79/93 (84.95%), Postives = 86/93 (92.47%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 MLLSEV LG++YELKKA MDKPP GKHSTKGLGKTVP ES+FVKWRDDV VPCGKP PS++R+SELMYNEYIVYNT+QVKMQFLLKVRFHHK Sbjct: 887 MLLSEVALGDMYELKKATSMDKPPRGKHSTKGLGKTVPLESEFVKWRDDVVVPCGKPVPSSIRSSELMYNEYIVYNTSQVKMQFLLKVRFHHK 979
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP1_ORYSJ (Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica GN=PARP1 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.520e-40 Identity = 75/93 (80.65%), Postives = 84/93 (90.32%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 MLLSEV LG++YELKKA MDKPP GKHSTKGLGKTVP ES+F KWRDDV VPCGKP P++++ SELMYNEYIVYNT+QVKMQ+LLKVRFHHK Sbjct: 884 MLLSEVALGDMYELKKATSMDKPPRGKHSTKGLGKTVPLESEFAKWRDDVVVPCGKPVPASIKTSELMYNEYIVYNTSQVKMQYLLKVRFHHK 976
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP1_ARATH (Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1 PE=1 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39 Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 MLLSEV LGE++EL KAKYMDKPP GKHSTKGLGK VPQ+S+F KWR DVTVPCGKP S V+ASELMYNEYIVY+TAQVK+QFLLKVRF HK Sbjct: 890 MLLSEVALGEIHELTKAKYMDKPPRGKHSTKGLGKKVPQDSEFAKWRGDVTVPCGKPVSSKVKASELMYNEYIVYDTAQVKLQFLLKVRFKHK 982
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP1_RAT (Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=2 SV=4) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 +LL EV LG +YELK A ++ K P GKHS KGLGKT P S + D V VP G PS V + L+YNEYIVY+ AQV +++LLK++F+ K Sbjct: 919 ILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTAPDPSASIT-LDGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKFNFK 1010
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP1_XENLA (Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis GN=parp1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 +LL EV LG ++ELK A + K P GKHS KGLG+T P S V+ D V VP GK +N+ + L+YNEYIVY+ AQV +++LLK++F++K Sbjct: 902 ILLGEVALGNMHELKAASQITKLPKGKHSVKGLGRTAPDPSATVQL-DGVDVPLGKGTSANISDTSLLYNEYIVYDIAQVNLKYLLKLKFNYK 993
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP1_MOUSE (Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 47/93 (50.54%), Postives = 63/93 (67.74%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 ++L EV LG +YELK A ++ K P GKHS KGLGKT P S + + V VP G PS V + L+YNEYIVY+ AQV +++LLK++F+ K Sbjct: 918 IMLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSASIT-LEGVEVPLGTGIPSGVNDTALLYNEYIVYDIAQVNLKYLLKLKFNFK 1009
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP1_HUMAN (Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4) HSP 1 Score: 93.2041 bits (230), Expect = 1.413e-18 Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 +LL EV LG +YELK A ++ K P GKHS KGLGKT P S + D V VP G S V + L+YNEYIVY+ AQV +++LLK++F+ K Sbjct: 919 ILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSANIS-LDGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYLLKLKFNFK 1010
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP1_CRIGR (Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.413e-18 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 +LL EV LG +YELK A ++ K P GKHS KGLGKT P S + + V VP G PS V + L+YNEYIVY+ AQV +++LLK++F+ K Sbjct: 918 ILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSASIT-LEGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKFNFK 1009
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP1_BOVIN (Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 47/93 (50.54%), Postives = 62/93 (66.67%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 +LL E LG +YELK A+++ K P GKHS KGLGKT P S + D V VP G S V + L+YNEYIVY+ AQV +++LLK++F+ K Sbjct: 921 ILLGEAALGNMYELKHARHISKLPKGKHSVKGLGKTTPDPSASIT-VDGVEVPLGTGISSGVNDTCLLYNEYIVYDIAQVHLKYLLKLKFNFK 1012
BLAST of CN189036 vs. ExPASy Swiss-Prot
Match: PARP_SARPE (Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.563e-17 Identity = 42/93 (45.16%), Postives = 63/93 (67.74%), Query Frame = -2 Query: 416 MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 694 MLLSEV LG++ E AKY+ K P+ KHS G G+T+P S+ + D V +P GKP ++ S L+YNE+I+Y+ AQV +Q++L++ F +K Sbjct: 904 MLLSEVALGDMMECTAAKYVTKLPNDKHSCFGRGRTMPNPSESIIREDGVEIPLGKPITNDSLKSSLLYNEFIIYDIAQVNIQYMLRMNFKYK 996 The following BLAST results are available for this feature:
BLAST of CN189036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189036 ID=CN189036; Name=CN189036; organism=Citrus sinensis; type=EST; length=695bpback to top |