CN189034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189034 vs. ExPASy Swiss-Prot
Match: KEULE_ARATH (SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2) HSP 1 Score: 254.218 bits (648), Expect = 5.135e-67 Identity = 128/168 (76.19%), Postives = 145/168 (86.31%), Query Frame = 2 Query: 5 AVRKDRTGEEQTWQLSRFYPMIEELIEKLGKRELPKDDYPCMNEPSPTVHAK---NQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLTV-DELSLDDIQI 496 AVRK+R EE WQLSRFYPMIEELIEKL K ELPK+D+PCMN+PSP+ H + +A+ SQ A SMRSRRTPTWA+PR SDDGYSSDSVLRHASSDF+KMGQRIFVFIVGGATRSEL+VCHKL+ KL RE+ILGSTSLDDPPQFITK+K+LT D+LSLDD+QI Sbjct: 500 AVRKERQ-EEAAWQLSRFYPMIEELIEKLSKGELPKEDFPCMNDPSPSFHGSTSLSSAASSSQGQAAQSMRSRRTPTWAKPRGSDDGYSSDSVLRHASSDFRKMGQRIFVFIVGGATRSELKVCHKLSTKLKREVILGSTSLDDPPQFITKLKLLTANDDLSLDDLQI 666
BLAST of CN189034 vs. ExPASy Swiss-Prot
Match: SEC1A_ORYSJ (Probable protein transport Sec1a OS=Oryza sativa subsp. japonica GN=Os04g0252400 PE=3 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 6.291e-57 Identity = 111/168 (66.07%), Postives = 136/168 (80.95%), Query Frame = 2 Query: 8 VRKDRTGEEQTWQLSRFYPMIEELIEKLGKRELPKDDYPCMNEPSPTVH----AKNQSAAISQPPVAHSMRSRRTP-TWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLTVDELSLDDIQI 496 +RK+R GEE W LSRFYP++EELIEKL K ELPKD+Y +N+PSP+ A Q++ QP A SMRSRRT TWARPR+SDDGYSSDSVL+H SS+ +K+GQR+FVF++GGATRSEL HKL+ KL REIILGS+SLDDPPQFITK+KML+ D+L+LDD+QI Sbjct: 500 IRKERIGEESKWMLSRFYPILEELIEKLSKGELPKDEYHYLNDPSPSFRGIPSASTQTSPAHQP--AQSMRSRRTGGTWARPRDSDDGYSSDSVLKHTSSNSRKLGQRLFVFVIGGATRSELCAAHKLSSKLKREIILGSSSLDDPPQFITKLKMLSTDDLTLDDLQI 665
BLAST of CN189034 vs. ExPASy Swiss-Prot
Match: SEC1B_ARATH (Protein transport Sec1b OS=Arabidopsis thaliana GN=SEC1B PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 4.509e-55 Identity = 112/165 (67.88%), Postives = 128/165 (77.58%), Query Frame = 2 Query: 5 AVRKDRTGEEQTWQLSRFYPMIEELIEKLGKRELPKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLT-VDELSLDDIQI 496 A R+DR GE QTWQLSRFYP++EEL+EKL K LPK DYPCMNEP PT ++ + S + S P + HS RRTPTWAR SDDGY SDSVL ASS FK+ GQRIFVFIVGGATRSELRVCHKLT KL+RE+ILGS+S DP F+TKMK L +E+SLDDI I Sbjct: 502 AARRDRVGETQTWQLSRFYPIVEELVEKLSKGHLPKQDYPCMNEPKPTFYSGSLSPSAS-PVLPHS---RRTPTWARRHLSDDGYFSDSVLGRASSGFKRKGQRIFVFIVGGATRSELRVCHKLTEKLDREVILGSSSFLDPLTFLTKMKQLNEEEEISLDDIVI 662
BLAST of CN189034 vs. ExPASy Swiss-Prot
Match: SEC1A_ARATH (Protein transport Sec1a OS=Arabidopsis thaliana GN=SEC1A PE=2 SV=3) HSP 1 Score: 213.001 bits (541), Expect = 1.312e-54 Identity = 106/167 (63.47%), Postives = 131/167 (78.44%), Query Frame = 2 Query: 5 AVRKDRTGEEQTWQLSRFYPMIEELIEKLGKRELPKDDYPCMNEPSPTVHAKNQSAAI--SQPPVA--------HSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLTVDEL 475 A RKDR+GEE+TWQL RFYPMIEEL+EKL K +L K DY CMN+ S ++ ++ ++ S P A HSMRSRRT TWARP +SDDGYSSDSVL+ AS++FKK+GQRIFVFI+GGATRSELRVCHKLT L RE++LGSTS DDPPQ+ITK+K+L+ ++ Sbjct: 494 ANRKDRSGEEETWQLFRFYPMIEELLEKLVKGDLSKSDYLCMNQSSHKEESEARTGSVRKSSAPTAVPERKATPHSMRSRRTATWARPHSSDDGYSSDSVLKSASTEFKKLGQRIFVFIIGGATRSELRVCHKLTSSLRREVVLGSTSFDDPPQYITKLKLLSEKDI 660
BLAST of CN189034 vs. ExPASy Swiss-Prot
Match: SEC1B_ORYSJ (Probable protein transport Sec1b OS=Oryza sativa subsp. japonica GN=Os06g0135900 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.158e-51 Identity = 101/156 (64.74%), Postives = 122/156 (78.21%), Query Frame = 2 Query: 5 AVRKDRTGEEQTWQLSRFYPMIEELIEKLGKRELPKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSM--RSRRTPTWARPRNSDDGYSSDS-VLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLT 463 A R +R ++TW LSRF+P+IEELIEKL K LP ++YP M+EPS T QSAA ++P A M RSRRTPTWA+ RNSDD SSDS VLRH S+DFK++G RIFVF++GGATRSELR HKLT KL REI+LGS+S+DDPPQFI+K+KMLT Sbjct: 497 AARTERQDGDETWALSRFFPLIEELIEKLSKGALPLNEYPSMSEPSSTEQGSTQSAAATKPAQAQPMSRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRLGNRIFVFMIGGATRSELRTVHKLTMKLKREIVLGSSSIDDPPQFISKLKMLT 652 The following BLAST results are available for this feature:
BLAST of CN189034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189034 ID=CN189034; Name=CN189034; organism=Citrus sinensis; type=EST; length=725bpback to top |