CN189032

Overview
NameCN189032
Unique NameCN189032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189032_ssr85 microsatellite CN189032_ssr85:85..96. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5659 contig Csv1_Contig5659:521..1169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.422e-28
Identity = 41/49 (83.67%), Postives = 48/49 (97.96%), Query Frame = -1
Query:  405 SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 551
            +VATE+F+VAPSLYMVE+RKSGGDTLEFHKFYKNL+TGLKD+VWK+ DE
Sbjct:  409 AVATEVFQVAPSLYMVEMRKSGGDTLEFHKFYKNLTTGLKDIVWKTIDE 457          

HSP 2 Score: 53.1434 bits (126), Expect = 6.422e-28
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = -3
Query:  532 IEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLICCNRDF 648
            IE AA+P+GFDVK NN+K+KL GEK+GRKG L      F
Sbjct:  377 IEAAAAPMGFDVKTNNYKMKLTGEKSGRKGQLAVATEVF 415          
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.014e-24
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = -1
Query:  405 SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWK------SGDE 551
            ++ATE+FEV PSLYMVELRKS GDTLEFHKFY N+S GLKDV+WK      +GDE
Sbjct:  389 AIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHNISNGLKDVMWKPESSIIAGDE 443          

HSP 2 Score: 49.6766 bits (117), Expect = 5.014e-24
Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = -3
Query:  532 IEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLICCNRDF 648
            IE AA P+GF+V+K N+KLKLQGE  GRKG L      F
Sbjct:  357 IEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVF 395          
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 4.123e-23
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = -1
Query:  408 SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 551
            +VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  385 NVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 432          

HSP 2 Score: 48.9062 bits (115), Expect = 4.123e-23
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = -3
Query:  553 IEEAASPLGFDVKKNNFKLKLQGEKTGRKGHL 648
            IEEAA PLGFDV+K N+KL+L+  K GRKG+L
Sbjct:  353 IEEAAKPLGFDVQKKNYKLRLEKVKAGRKGNL 384          
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPKQ_ARATH (CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.386e-22
Identity = 36/49 (73.47%), Postives = 44/49 (89.80%), Query Frame = -1
Query:  402 VATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDET 548
            VATEIF+V+PSL+M+E+RK+ GDTLEFHKFYK LST L DVVWKSG+ +
Sbjct:  387 VATEIFQVSPSLHMIEVRKTKGDTLEFHKFYKKLSTSLNDVVWKSGESS 435          

HSP 2 Score: 45.0542 bits (105), Expect = 3.386e-22
Identity = 18/32 (56.25%), Postives = 26/32 (81.25%), Query Frame = -3
Query:  553 IEEAASPLGFDVKKNNFKLKLQGEKTGRKGHL 648
            IEEA+ PLGFD++K N+K++L+    GRKG+L
Sbjct:  354 IEEASKPLGFDIQKKNYKMRLENVTAGRKGNL 385          
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.034e-20
Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = -1
Query:  405 SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 551
            +VATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVWK   E
Sbjct:  393 NVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGE 441          

HSP 2 Score: 47.3654 bits (111), Expect = 1.034e-20
Identity = 19/32 (59.38%), Postives = 27/32 (84.38%), Query Frame = -3
Query:  553 IEEAASPLGFDVKKNNFKLKLQGEKTGRKGHL 648
            IEEAA PLGFD++K N+K++++  K GRKG+L
Sbjct:  361 IEEAAKPLGFDIQKKNYKMRMENLKAGRKGNL 392          
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.276e-20
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = -1
Query:  408 SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 551
            +VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  401 NVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 448          

HSP 2 Score: 39.6614 bits (91), Expect = 2.276e-20
Identity = 23/48 (47.92%), Postives = 27/48 (56.25%), Query Frame = -3
Query:  553 IEEAASPLGFDVKKNN----------------FKLKLQGEKTGRKGHL 648
            IEEAA PLGFDV+K N                FKL+L+  K GRKG+L
Sbjct:  353 IEEAAKPLGFDVQKKNYKICSPCLTTICMNIPFKLRLEKVKAGRKGNL 400          
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.961e-20
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = -1
Query:  408 SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 551
            +VATEIF+VAPSL+MV++ KS GDTLEFHKFYK LS  L+ VVW + +
Sbjct:  387 NVATEIFQVAPSLHMVQVSKSKGDTLEFHKFYKKLSNSLEQVVWTNNE 434          

HSP 2 Score: 48.9062 bits (115), Expect = 2.961e-20
Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = -3
Query:  553 IEEAASPLGFDVKKNNFKLKLQGEKTGRKGHL 648
            IEEAA PLGFDV+K N+K++L+  K GRKG+L
Sbjct:  355 IEEAAKPLGFDVQKKNYKMRLENVKAGRKGNL 386          
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.015e-19
Identity = 32/48 (66.67%), Postives = 42/48 (87.50%), Query Frame = -1
Query:  408 SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 551
            ++ATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVW+  D
Sbjct:  392 NIATEVFQVAPSLHVVELKKAKGDTLEFQKFYQTLSTQLKDVVWELED 439          

HSP 2 Score: 43.1282 bits (100), Expect = 9.015e-19
Identity = 17/32 (53.12%), Postives = 27/32 (84.38%), Query Frame = -3
Query:  553 IEEAASPLGFDVKKNNFKLKLQGEKTGRKGHL 648
            IEEAA+ LGF+++K N++++++  K GRKGHL
Sbjct:  360 IEEAANLLGFNIQKRNYRMRMENIKEGRKGHL 391          
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 8.965e-17
Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = -1
Query:  414 RKXXXXXSFKGKKLDARVI*SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 611
            RK       KG K   +   SVATE+FEVAPSL++VELRK+GGDTLEFHKFYKN S+GLKDVVW +
Sbjct:  373 RKDNYKIKMKGDKSGRKGQLSVATEVFEVAPSLHVVELRKTGGDTLEFHKFYKNFSSGLKDVVWNT 438          
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.608e-16
Identity = 42/66 (63.64%), Postives = 48/66 (72.73%), Query Frame = -1
Query:  414 RKXXXXXSFKGKKLDARVI*SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 611
            RK       KG K   +   SVATE+FEVAPSL+MVELRK+GGDTLEFH FY N S+ LKD+VWKS
Sbjct:  381 RKQNYKMKLKGDKTGRKGYLSVATEVFEVAPSLHMVELRKTGGDTLEFHNFYNNFSSELKDIVWKS 446          
The following BLAST results are available for this feature:
BLAST of CN189032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CIPKN_ARATH6.422e-2883.67CBL-interacting serine/threonine-protein kinase 23... [more]
CIPKN_ORYSJ5.014e-2470.91CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPKW_ORYSJ4.123e-2379.17CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPKQ_ARATH3.386e-2273.47CBL-interacting serine/threonine-protein kinase 26... [more]
CIPKV_ORYSJ1.034e-2069.39CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
CIPKX_ORYSJ2.276e-2079.17CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPK3_ARATH2.961e-2066.67CBL-interacting serine/threonine-protein kinase 3 ... [more]
CIPK3_ORYSJ9.015e-1966.67CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]
CIPK9_ARATH8.965e-1765.15CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPK9_ORYSJ2.608e-1663.64CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D10_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189032 ID=CN189032; Name=CN189032; organism=Citrus sinensis; type=EST; length=650bp
TTTTTTTTTTTTTTAATCTAGAAAAAATAATTCTTTTACAATATCTTCTT
TTTATTGAATTTTCTGGTCCATAGACAAGTCACTACAAACAAACAAAATG
AAAACGACAGTGGACTGAGACTCTTTTTGATAATTTGCAGGTAATTGACT
ATGTTCAATATCCGTTGAGATGATACATCTGGAAGTCTGAAACCACACAA
AAGCCAAACCAAGGTACACGAGAAGTGAGTTCTGAATCACAAATGAAGGA
AACACATGGCCTAGAGGATAAAATACAAAGCTGAGATACAATGGTGCAAA
AGCAATATATAATTTGCTGGAGATATTCAGCAGTGCAAGTCATGAAAGGA
AATCCGCTATTGAGACCCTGCGCCACCAGCGACTGCAGATCCTTCAACAA
TTGTTTCATCTCCTGATTTCCAAACAACATCTTTCAGCCCAGTCGAAAGG
TTTTTGTAAAACTTGTGAAATTCTAAGGTATCTCCTCCAGATTTTCGAAG
CTCAACCATGTAAAGTGAAGGGGCCACCTCAAAAATCTCTGTTGCAACAG
ATTAAATGACCCTTGCGTCCAGTTTTTTCCCCTTGAAGCTTCAACTTGAA
ATTATTTTTCTTCACATCAAAACCCAAAGGCGATGCAGCTTCCTCAATTT
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