CN189009

Overview
NameCN189009
Unique NameCN189009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1526 contig Csv1_Contig1526:676..1423. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN189009 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.293e-64
Identity = 115/137 (83.94%), Postives = 127/137 (92.70%), Query Frame = -3 
Query:  336 ISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGVPSSYCSGQLDPQKVL 746
            ISEVRVEGLET+DYLDNL+ KERFTEQGDAI FESEVDK+YL+ P+KIAI+DHEKK+TFV+ K+GLPDAVVWNPWDKKAKAM DFGD EYK+MLCVE AAVEKPITLKPGEEW+GR+ LS VPSSYCSGQLDP KVL
Sbjct:  191 ISEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNPWDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSSYCSGQLDPLKVL 327
[Close]
BLAST of CN189009 vs. ExPASy Swiss-Prot
Match: YMY9_YEAST (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11
Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = -3 
Query:  408 ISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKK-RTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDE-YKHMLCVEAAAVEKPITLKPGEEW 746
            I    V  L  +   D L  KE + ++   +TF  E D IY +   + AI   +K  +   +++  LPD VVWNPW +K++ MADF     Y+ M+C+E   V   I+L PG++W
Sbjct:  167 IEGTMVSNLAGMKLYDQLL-KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDKGVQIHTLKRYNLPDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKW 280
The following BLAST results are available for this feature:
BLAST of CN189009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AAPC_CENCI4.293e-6483.94Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
YMY9_YEAST1.892e-1134.78Glucose-6-phosphate 1-epimerase OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C20_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189009 ID=CN189009; Name=CN189009; organism=Citrus sinensis; type=EST; length=748bp
TTTTTTTTTTTTTTTACATGTAATATGATCTCATTCGTGGTATCCATAAT
TTTCACCATTCTAATCATATTATATGTTTATTATTCGTTCTACTTTGACA
CAACTCGAGTGATACTCATCCATCGTTCAAACAGTCTTGTCTTTAAGAGC
TACATTATTTCACAACTCCTATTTAGTCACGAATCCATCTCTTTGACCAG
GATAATGGAAATTCACATGGAGAAAAAACAAAATATATTGGCCAGACATC
AATACAAATCCACAGGCTGCTGCAAACAAATACGGATTACCTGTACAGAA
TATAGACCAGACTGATGGATCCTTCAGCTGCTCGAGAGAACTTTCTGTGG
ATCAAGTTGCCCACTACAATAACTAGACGGAACACCAGAAAGTTCCAGCC
TTCCTTTCCACTCCTCCCCAGGTTTCAATGTAATCGGTTTTTCAACAGCA
GCTGCCTCCACGCACAACATATGCTTATACTCATCATCCCCAAAATCAGC
CATAGCTTTTGCTTTCTTATCCCATGGATTCCACACCACAGCATCTGGAA
GCCCATCTTTACGAATGACAAACGTTCTCTTCTTTTCATGATCCAGAATT
GCAATCTTTGTAGGAGTACTGAGGTATATCTTGTCCACTTCTGATTCAAA
TGTTATTGCATCCCCTTGTTCAGTAAAACGCTCCTTATTCTGCAAGTTGT
CGAGGTAATCCAGTGTCTCCAATCCTTCAACACGAACTTCACTGATGT
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