CN189006
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189006 vs. ExPASy Swiss-Prot
Match: MUC1_YEAST (Flocculation protein FLO11 OS=Saccharomyces cerevisiae GN=MUC1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.457e-12 Identity = 62/208 (29.81%), Postives = 94/208 (45.19%), Query Frame = 3 Query: 6 SSLPFPTTEASLSFPTTDAGLSFPATGSGLPFPT---TTQETIQIQVSSATNSSLPFPTTDSGLSFPTTAQETIRIQVSSAT---NSSLPFPTTTKETIQI*VSSATNSSLPFPTTNAGLSFPTTSQETIQVPVSSTTDSSLPFPTTTQETIQ-----ILVSSATNSSLPFPTTDAGLSFPTTSQETVRVQVSSATNSSLPFPTATSA 596 SS P PT +S + ++ S S P PT +T E+ V+S+T S P T S TT + + S++ +SS P ++T E+ V+S+T S P T++ TT + V S+T SS P PT + T + + S+ +SS P PT S TT + V S+ +SS P PT +S+ Sbjct: 325 SSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSS-----TTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSS-----TTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTP----SSSTTESSSAPVTSSTTESSSAPVPTPSSS 518 HSP 2 Score: 70.4774 bits (171), Expect = 8.433e-12 Identity = 78/240 (32.50%), Postives = 106/240 (44.17%), Query Frame = 3 Query: 6 SSLPFPT----TEASLSFPTTDA---GLSFPAT-----GSGLPFPT---TTQETIQIQVSSATNSSLPFPTTDS-------GLSFPTTAQETIRIQVSSATNSSLPFPT---TTKETIQI*VSSAT--NSSLPFPT----TNAGLSFPTTSQET------IQVPVSSTTD-SSLPFPTTTQETIQ-----ILVSSATNSSLPFPTTDAGLSFPTTSQETVRVQVSSATNSSLPFPTATSA 596 SS P PT T S S P T + S P T S P PT +T E+ V+S+T S P T S ++ TT + + S+ +SS P PT +T E+ V+S+T +SS P PT T S P TS T + P SSTT+ SS P PT + T + + S+ +SS P PT S TT + V S+ +SS P PT +S+ Sbjct: 352 SSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTP----SSSTTESSSTPVTSSTTESSSAPVPTPSSS 587 HSP 3 Score: 67.781 bits (164), Expect = 5.466e-11 Identity = 69/229 (30.13%), Postives = 97/229 (42.36%), Query Frame = 3 Query: 6 SSLPFPTTEASLSFPTTDAGLSFPATGSGLPFPTTTQETIQIQV--------SSATNSSLPFPTTDSGLSFPTTAQETIRIQVSSATNSSLPFPTTTKETIQI*V---SSATNSSLPFPTTNAGLSFPTTSQETIQVPVSSTTD-SSLPFPTTTQETIQILV---SSATNSSLPFPTTDAGLSFPTTSQETVRVQVSSATNSSL-PFPTATSALRLCIS-PSSLPLLES 641 SS P PT +S + ++ S S P PT + T + S+ +SS P PT S TT + + S+ +SS P ++T E+ V SS+T S P S +S + P SSTT+ SS P ++T E+ V SS+T S P S +S V SS T SS+ P PT +S+ + S PSS P S Sbjct: 607 SSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSS----TTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPSSTPFSSS 831
BLAST of CN189006 vs. ExPASy Swiss-Prot
Match: MUC5A_HUMAN (Mucin-5AC (Fragments) OS=Homo sapiens GN=MUC5AC PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12 Identity = 71/215 (33.02%), Postives = 97/215 (45.12%), Query Frame = 3 Query: 6 SSLPFPTTEASLSFPTTDAGLSFPATGSGLPFPTTTQETIQIQVSSATNSSLPFPTTDSGLSFPTTAQETIRIQVSSA---TNSSLPFPTTTKETIQI*VSSATNSSLPFPTTNAGLSFPTTSQ------ETIQVPVSSTTD----SSLPFPTT-TQETIQILVSSATNSSLPFPTTDAGLSFPTTS----QETVRVQVSSATNSSLPFPTATSA 596 S+ PTT + S PTT + T S P +TT +S+ T S++ PTT S S PT + + SSA +S P +TT I +S+ T S+ P T+ +S PTTS T P +STT S+ PTT T T Q +SSA SS T + +S PTTS T +++ SS P + TSA Sbjct: 3119 STTSAPTTSTT-SAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTISAPTTSTISAPTT-STTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSAPITSTISAPTTSTTSTPQTST-ISSPTTSTTPTPQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTASTISAPTTSTTSFHTTSTTSPPTSSTSSTPQTSKTSA 3330 HSP 2 Score: 69.3218 bits (168), Expect = 1.879e-11 Identity = 69/209 (33.01%), Postives = 98/209 (46.89%), Query Frame = 3 Query: 6 SSLPFPTTEASLSFPTTDAG-LSFPATGSGLPFPTTTQETIQIQVSSATNS-SLPFPTTDSGLSFPTTAQETIRIQVSSATNSSLPFPTT-TKETIQI*VSSATNSSLPFPTTNAGLSFPTTSQETIQVPVSSTTDSSLPFPTTTQETIQILVSSATNSSLPFPTTDAGLSFPTTSQETVRVQVSSATNSSLPFPTATSALRLCISPSS 623 SS+ T ++ S PTT S P+T S TT+ T + T++ S P TT S + TT+ T +S+ T S++ PTT T +SA S+ PTTN S PTTS T P++ST + T+T +T I SS T S+ P P T S PTTS T +S T++ T+T + +P+S Sbjct: 3086 SSITSTTQTSTTSAPTTSTTPASIPSTTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTST-ISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNT-TSAPTTS--TTSAPITSTISAPTTSTTSTPQTSTI--SSPTTSTTPTPQTST-TSSPTTS--TTSAPTTSTTSAPTTSTTSTPQTSISSAPTS 3285 The following BLAST results are available for this feature:
BLAST of CN189006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189006 ID=CN189006; Name=CN189006; organism=Citrus sinensis; type=EST; length=642bpback to top |