CN189003

Overview
NameCN189003
Unique NameCN189003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:353..1184. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.749e-64
Identity = 121/166 (72.89%), Postives = 135/166 (81.33%), Query Frame = -1
Query:  335 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 832
            EA INEQINVEYNVSYVYHA++AYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDH EKGDALYAMELALSLEKLTNEKLL+LHSVA +NND Q+A+F+ESEFLGEQVEAI KI++YV+QLR VGKGHG+WHFDQMLLHE   A
Sbjct:   90 EATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVA 255          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.964e-63
Identity = 120/163 (73.62%), Postives = 135/163 (82.82%), Query Frame = -1
Query:  344 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEG 832
            EAA+NEQINVEYNVSYVYHAL+AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P SEFDHA+KGDAL+AMELALSLEKLTNEKLL LHSVA +N D Q+A+FVESEFLGEQVE+I +I++YV+QLR VGKGHG+WHFDQMLLHEG
Sbjct:   84 EAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEG 246          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.273e-62
Identity = 119/167 (71.26%), Postives = 139/167 (83.23%), Query Frame = -1
Query:  335 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE-GDAA 832
            E+A+NEQINVEYNVSYVYHA++AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P S+FDHA+KGDAL+AMELALSLEKLTNEKLL+LHSVA +N D Q+A+FVE+E+LGEQVEAI +I++YV+QLR VGKGHG+WHFDQMLLHE GDAA
Sbjct:   81 ESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGDAA 247          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.273e-62
Identity = 116/164 (70.73%), Postives = 136/164 (82.93%), Query Frame = -1
Query:  341 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGD 832
            E+AINEQINVEYNVSYVYHAL+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H+EKGDALYAMELALSLEKLTNEKLL +HSVA+RNNDPQ A+F+ESEFL EQV++I KIA+YV+QLR+VGKGHG+WHFDQ LLH+ D
Sbjct:   92 ESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDED 255          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.273e-62
Identity = 115/161 (71.43%), Postives = 134/161 (83.23%), Query Frame = -1
Query:  350 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 832
            EA INEQINVEYNVSYVYH++YAYFDRDN+A++GL                 FMEYQN RGG+VKLH I+ P SEF+HAEKGDALYAMELALSLEKLTNEKLL++H VA  NNDPQ+A+FVESEFLGEQ+EAI KI+ Y++QLRM+GKGHG+WHFDQMLL+
Sbjct:   95 EAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.662e-62
Identity = 116/162 (71.60%), Postives = 134/162 (82.72%), Query Frame = -1
Query:  347 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 832
            EAAINEQINVEYNVSYVYH+L+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H EKGDALYAMELALSLEKLTNEKLL +HSVADRNND Q+A+F+ESEFL EQVE+I KIA+YV+QLR+VGKGHG+WHFDQ LLH+
Sbjct:   95 EAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLHD 256          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.704e-62
Identity = 116/161 (72.05%), Postives = 134/161 (83.23%), Query Frame = -1
Query:  350 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 832
            EAAINEQINVEYNVSYVYH++YAYFDRDN+AL+GL                 FMEYQN RGG+V LH I+ P S+F+HAEKGDALYAMELALSLEKLTNEKLL+LH VA  NNDPQ+A+FVESEFLGEQ+EAI KI+ +++QLRMVGKGHG+WHFDQMLL+
Sbjct:   94 EAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLLN 254          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.251e-62
Identity = 115/166 (69.28%), Postives = 132/166 (79.52%), Query Frame = -1
Query:  335 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 832
            E+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKL NEKL S+HSVADRN DPQ+A+F+ESEFL EQVEAI KI++YV+QLRMVGKGHG+WHFDQ LLH+G AA
Sbjct:   89 ESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLLHDGHAA 254          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.913e-60
Identity = 114/162 (70.37%), Postives = 131/162 (80.86%), Query Frame = -1
Query:  347 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 832
            EAA+NEQINVEYNVSYVYH +YAYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDHAE+GDALYAMELALSL KLTN+KLL+LH+VA RNND Q+A+FVES++L EQVEAI  I++YV+QLR VGKGHG+WHFDQMLL E
Sbjct:   93 EAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKGHGVWHFDQMLLQE 254          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.009e-59
Identity = 111/160 (69.38%), Postives = 129/160 (80.62%), Query Frame = -1
Query:  353 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 832
            E+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH+I   PSEF+H EKGDALYAMELALSLEKL NEKLL++HSVADRNNDPQMA+F+ESEFL EQVE+I KI++YV+QLR VGKGHG+WHFDQ LL
Sbjct:   90 ESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
The following BLAST results are available for this feature:
BLAST of CN189003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRI3_SOYBN6.749e-6472.89Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI2_VIGUN1.964e-6373.62Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_SOYBN1.273e-6271.26Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI2_SOYBN1.273e-6270.73Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_ARATH1.273e-6271.43Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_VIGUN1.662e-6271.60Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI1_BRANA3.704e-6272.05Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI_PHAVU8.251e-6269.28Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI2_TOBAC5.913e-6070.37Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI_MALXI1.009e-5969.38Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189003 ID=CN189003; Name=CN189003; organism=Citrus sinensis; type=EST; length=832bp
TTTTTTTTTTTTGCGAACAGAACTTTTATTGAACAACTTAATTATATTTA
TACAATCAGAAGATGGATTTGGTGCTCTGCTTAAACTATTAGATCCCTTC
ACACAGTCTGTTACTAAATAAAGAAAAAGCACCATCAAAAAGACTATCTA
AATGCGACCACACTAATATGATAAAGCAAGGAGGCTATTGAGTATTAACT
TTGTAGGACTTAACACTGTTTCAGCTTATTTTTTGTCAACACACTCAACC
TCCTGTGGCAGAGATACTTCAGAACATTTGGCAGAAAAGAGTTGACTAAA
GCACAAAGAAATGTAACAATATGGTTCTTCATCATGCAGCATCACCCTCG
TGGAGAAGCATTTGATCGAAGTGCCATAATCCGTGGCCTTTCCCAACCAT
CCTCAGTTGAGAAACATATTTTGCGATCTTGTTAATTGCTTCAACCTGCT
CACCCAAAAATTCACTCTCGACAAACTCTGCCATTTGGGGATCATTGTTT
CTATCCGCCACACTGTGCAGGCTCAGAAGCTTCTCGTTTGTTAGCTTCTC
CAGGGACAATGCTAGTTCCATTGCATACAAGGCATCCCCTTTCTCCGCAT
GATCAAACTCCGAAGGGGGCTGCATTATGGAGTGCAGTTTTACTTTTCCA
CCGCGCAAGTTCTGATACTCCATAAACTTCTCAGCATGTTCCCTTTCTTC
TTCACTGGACTCCTTGAAAAATTTGGCAAGGCCTCTCAGAGCAATATTAT
CCCGATCAAAGTACGCATACAGGGCATGGTACACGTATGAGACATTATAT
TCCACATTGATCTGCTCGTTGATAGCGGCCTC
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