CN188993

Overview
NameCN188993
Unique NameCN188993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188993 vs. ExPASy Swiss-Prot
Match: BXL1_ARATH (Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 1.173e-101
Identity = 172/197 (87.31%), Postives = 186/197 (94.42%), Query Frame = 3
Query:  159 FACDPRNGLTRSLRFCRTSVPIHVRVQDLIGRLTLQEKIRLLVNNAAAVPRLGIQGYEWWSEALHGVSNVGPGTRFGGAFPGATSFPQVITTAAAFNESLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGN-TGSRLKVAACCKHYTAYDLDNWNGVDRYPF 746
            FACDP NGLTR+LRFCR +VPIHVRVQDL+GRLTLQEKIR LVNNAAAVPRLGI GYEWWSEALHG+S+VGPG +FGGAFPGATSFPQVITTAA+FN+SLWEEIGRVVSDEARAMYNGG+AGLTYWSPNVNI RDPRWGRGQETPGEDP+++ KYAASYVRGLQG   G+RLKVAACCKHYTAYDLDNWNGVDR+ F
Sbjct:   35 FACDPANGLTRTLRFCRANVPIHVRVQDLLGRLTLQEKIRNLVNNAAAVPRLGIGGYEWWSEALHGISDVGPGAKFGGAFPGATSFPQVITTAASFNQSLWEEIGRVVSDEARAMYNGGVAGLTYWSPNVNILRDPRWGRGQETPGEDPIVAAKYAASYVRGLQGTAAGNRLKVAACCKHYTAYDLDNWNGVDRFHF 231          
BLAST of CN188993 vs. ExPASy Swiss-Prot
Match: BXL2_ARATH (Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.256e-95
Identity = 167/219 (76.26%), Postives = 186/219 (84.93%), Query Frame = 3
Query:   90 FLFLTLFLIFSCFGSRFVESRVPFACDPRNGLTRSLRFCRTSVPIHVRVQDLIGRLTLQEKIRLLVNNAAAVPRLGIQGYEWWSEALHGVSNVGPGTRFGGAFPGATSFPQVITTAAAFNESLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYPF 746
            FL + LF + S   S  V SR  FACD ++  T +LRFC+ SVPI  RV+DLIGRLTL EK+ LL N AAA+PRLGI+GYEWWSEALHGVSNVGPGT+FGG +P ATSFPQVITT A+FN SLWE IGRVVS+EARAMYNGG+ GLTYWSPNVNI RDPRWGRGQETPGEDPV++GKYAASYVRGLQGN  SRLKVAACCKH+TAYDLDNWNGVDR+ F
Sbjct:    8 FLAVILFFLISS-SSVCVHSRETFACDTKDAATATLRFCQLSVPIPERVRDLIGRLTLAEKVSLLGNTAAAIPRLGIKGYEWWSEALHGVSNVGPGTKFGGVYPAATSFPQVITTVASFNASLWESIGRVVSNEARAMYNGGVGGLTYWSPNVNILRDPRWGRGQETPGEDPVVAGKYAASYVRGLQGNDRSRLKVAACCKHFTAYDLDNWNGVDRFHF 225          
BLAST of CN188993 vs. ExPASy Swiss-Prot
Match: BXL4_ARATH (Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.014e-77
Identity = 145/224 (64.73%), Postives = 166/224 (74.11%), Query Frame = 3
Query:   87 HFLFLTLFLIFSCFGSRFVESRVPFACD-PRNGLTRSLRFCRTSVPIHVRVQDLIGRLTLQEKIRLLVNNAAAVPRLGIQGYEWWSEALHGVSNVGPGTRFGGAFPGATSFPQVITTAAAFNESLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQ---GNTGSRLKVAACCKHYTAYDLDNWNGVDRYPF 746
            + +FL  FL F  F +   +S   FACD   N    +  FC T + I  RV DL+ RLTLQEKI  LV+ A  V RLGI  YEWWSEALHGVS +GPGT F    PGATSFPQVI TAA+FN SL++ IG+VVS EARAMYN G+AGLTYWSPNVNIFRDPRWGRGQETPGEDP+L+ KYA+ YV+GLQ   G   +RLKVAACCKHYTAYD+DNW GV+RY F
Sbjct:   22 YLIFLCFFLYFLNFSN--AQSSPVFACDVAANPSLAAYGFCNTVLKIEYRVADLVARLTLQEKIGFLVSKANGVTRLGIPTYEWWSEALHGVSYIGPGTHFSSQVPGATSFPQVILTAASFNVSLFQAIGKVVSTEARAMYNVGLAGLTYWSPNVNIFRDPRWGRGQETPGEDPLLASKYASGYVKGLQETDGGDSNRLKVAACCKHYTAYDVDNWKGVERYSF 243          
BLAST of CN188993 vs. ExPASy Swiss-Prot
Match: BXL5_ARATH (Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 3.216e-75
Identity = 133/221 (60.18%), Postives = 159/221 (71.95%), Query Frame = 3
Query:   96 FLTLFLIFSCFGSRFVESRVPFACDPRNGLTRSLRFCRTSVPIHVRVQDLIGRLTLQEKIRLLVNNAAAVPRLGIQGYEWWSEALHGVSNVGPGTRFGGAFPGATSFPQVITTAAAFNESLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQ----GNTGSRLKVAACCKHYTAYDLDNWNGVDRYPF 746
            F+ L L+     S   ES+  FACD     T    FC  S+    R +DL+ RL+L+EK++ LVN A  VPRLG+  YEWWSEALHGVS+VGPG  F G  PGATSFP  I TAA+FN SLW ++G VVS EARAM+N G+AGLTYWSPNVN+FRDPRWGRGQETPGEDP++  KYA +YV+GLQ         RLKV++CCKHYTAYDLDNW G+DR+ F
Sbjct:    6 FVRLSLLIIALVSSLCESQKNFACDISAPATAKYGFCNVSLSYEARAKDLVSRLSLKEKVQQLVNKATGVPRLGVPPYEWWSEALHGVSDVGPGVHFNGTVPGATSFPATILTAASFNTSLWLKMGEVVSTEARAMHNVGLAGLTYWSPNVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVKGLQDVHDAGKSRRLKVSSCCKHYTAYDLDNWKGIDRFHF 226          
BLAST of CN188993 vs. ExPASy Swiss-Prot
Match: BXL3_ARATH (Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.486e-75
Identity = 145/225 (64.44%), Postives = 162/225 (72.00%), Query Frame = 3
Query:   90 FLFLTLFLIFS-CFGSRFVESRVP-FACDPR-NGLTRSLRFCRTSVPIHVRVQDLIGRLTLQEKIRLLVNNAAAVPRLGIQGYEWWSEALHGVSNVGPGTRFGGAFPGATSFPQVITTAAAFNESLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQ---GNTGSRLKVAACCKHYTAYDLDNWNGVDRYPF 746
            F   TLFL F  C   +      P FACD   N     LRFC   + I  RV DL+GRLTL+EKI  L + A  V RLGI  Y+WWSEALHGVSNVG G+RF G  PGATSFPQVI TAA+FN SL++ IG+VVS EARAMYN G AGLT+WSPNVNIFRDPRWGRGQETPGEDP LS KYA +YV+GLQ   G   +RLKVAACCKHYTAYD+DNW  V+R  F
Sbjct:    9 FSVSTLFLCFIVCISEQSNNQSSPVFACDVTGNPSLAGLRFCNAGLSIKARVTDLVGRLTLEEKIGFLTSKAIGVSRLGIPSYKWWSEALHGVSNVGGGSRFTGQVPGATSFPQVILTAASFNVSLFQAIGKVVSTEARAMYNVGSAGLTFWSPNVNIFRDPRWGRGQETPGEDPTLSSKYAVAYVKGLQETDGGDPNRLKVAACCKHYTAYDIDNWRNVNRLTF 233          
BLAST of CN188993 vs. ExPASy Swiss-Prot
Match: BXL7_ARATH (Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 4.068e-70
Identity = 127/225 (56.44%), Postives = 158/225 (70.22%), Query Frame = 3
Query:   99 LTLFLIFSCFGSRFVESRVP-FACDPRNGLTRSLRFCRTSVPIHVRVQDLIGRLTLQEKIRLLVNNAAAVPRLGIQGYEWWSEALHGVSNVGPGTRFGGAFPGATSFPQVITTAAAFNESLWEEIGRVVSDEARAMYNGGMA-GLTYWSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGNT-------GSRLKVAACCKHYTAYDLDNWNGVDRYPF 746
            L L L+F   G   VES  P  +CDP N  T+  +FCRT +PI  R +DL+ RLT+ EKI  LVN A  +PRLG+  YEWWSEALHGV+  GPG RF G    ATSFPQVI TAA+F+   W  I +V+  EAR +YN G A G+T+W+PN+NIFRDPRWGRGQETPGEDP+++G YA +YVRGLQG++        + L+ +ACCKH+TAYDLD W G+ RY F
Sbjct:    6 LLLLLLFIVHG---VESAPPPHSCDPSNPTTKLYQFCRTDLPIGKRARDLVSRLTIDEKISQLVNTAPGIPRLGVPAYEWWSEALHGVAYAGPGIRFNGTVKAATSFPQVILTAASFDSYEWFRIAQVIGKEARGVYNAGQANGMTFWAPNINIFRDPRWGRGQETPGEDPMMTGTYAVAYVRGLQGDSFDGRKTLSNHLQASACCKHFTAYDLDRWKGITRYVF 227          
BLAST of CN188993 vs. ExPASy Swiss-Prot
Match: BXL6_ARATH (Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.198e-59
Identity = 114/240 (47.50%), Postives = 144/240 (60.00%), Query Frame = 3
Query:   99 LTLFLIFSCFGSRF--VESRVPFACDPRNGLTRSLRFCRTSVPIHVRVQDLIGRLTLQEKIRLLVNNAAAVPRLGIQGYEWWSEALHGVSNVGPGTRFGGAFPGATSFPQVITTAAAFNESLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQ----------------------GNTGSRLKVAACCKHYTAYDLDNWNGVDRYPF 746
            ++L    S     F  ++S   F C P +    S  FC  S+ I  R   L+  L L EKI  L N AA+VPRLGI  YEWWSE+LHG+++ GPG  F G+   ATSFPQVI +AA+FN +LW EIG  V+ E RAMYNGG AGLT+W+PN+N+FRDPRWGRGQETPGEDP +  +Y   +VRG Q                       +   +L ++ACCKH+TAYDL+ W    RY F
Sbjct:    8 ISLLFFTSAIAETFKNLDSHPQFPCKPPH--FSSYPFCNVSLSIKQRAISLVSLLMLPEKIGQLSNTAASVPRLGIPPYEWWSESLHGLADNGPGVSFNGSISAATSFPQVIVSAASFNRTLWYEIGSAVAVEGRAMYNGGQAGLTFWAPNINVFRDPRWGRGQETPGEDPKVVSEYGVEFVRGFQEKKKRKVLKRRFSDDVDDDRHDDDADGKLMLSACCKHFTAYDLEKWGNFTRYDF 245          
BLAST of CN188993 vs. ExPASy Swiss-Prot
Match: BGLS_SCHPO (Putative beta-glucosidase OS=Schizosaccharomyces pombe GN=SPBC1683.04 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 58/166 (34.94%), Postives = 82/166 (49.40%), Query Frame = 3
Query:  234 VQDLIGRLTLQEKIRLLVN----NAAAVPRLGIQGYEWWSEALHGVSNVGPGTRFGGAFPGATSFPQVITTAAAFNESLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDN 719
            V+DLI +L + EK  LL      + AA+PRL I      S+  +G+     GT F  + P A  FP      A F++ L  E+G  +++EA+A     + G     P VNI R P  GRG E+  ED  LSG  A+  + GLQ        V AC KH+   D+++
Sbjct:    6 VEDLINQLDISEKAMLLSGTDLWHTAAIPRLNIPSIRL-SDGPNGIR----GTSFFNSSPSAC-FPCGTALGATFDKKLLFEVGEYLAEEAKAKGVSVVLG-----PTVNIHRGPLNGRGFESFSEDSTLSGLAASYVILGLQSK-----NVQACIKHFVCNDMED 155          
The following BLAST results are available for this feature:
BLAST of CN188993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
BXL1_ARATH1.173e-10187.31Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL... [more]
BXL2_ARATH1.256e-9576.26Probable beta-D-xylosidase 2 OS=Arabidopsis thalia... [more]
BXL4_ARATH2.014e-7764.73Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL... [more]
BXL5_ARATH3.216e-7560.18Probable beta-D-xylosidase 5 OS=Arabidopsis thalia... [more]
BXL3_ARATH5.486e-7564.44Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL... [more]
BXL7_ARATH4.068e-7056.44Probable beta-D-xylosidase 7 OS=Arabidopsis thalia... [more]
BXL6_ARATH7.198e-5947.50Probable beta-D-xylosidase 6 OS=Arabidopsis thalia... [more]
BGLS_SCHPO1.330e-1234.94Putative beta-glucosidase OS=Schizosaccharomyces p... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188993 ID=CN188993; Name=CN188993; organism=Citrus sinensis; type=EST; length=753bp
GAGGCAAAAAAGAAAACATAAAAAGAAAAAGAACCCTCTTGTATTAATTG
TTGTTATTATTCTTTTGTTTGATAATAATGCCTCGTCACTTTTTGTTTCT
CACACTCTTCTTGATCTTTTCCTGCTTCGGCTCCCGTTTCGTGGAATCGC
GTGTCCCGTTTGCATGCGACCCGCGAAACGGGCTGACGAGGAGCTTGAGA
TTCTGCCGGACGTCGGTGCCGATTCATGTCAGGGTGCAGGACTTGATCGG
ACGGCTGACATTGCAGGAGAAGATAAGGCTGCTCGTGAACAATGCGGCGG
CTGTGCCCAGGCTTGGGATTCAGGGATACGAGTGGTGGTCCGAGGCTCTT
CATGGGGTGTCAAATGTGGGTCCCGGGACTAGGTTCGGTGGGGCCTTCCC
TGGGGCCACTAGCTTCCCTCAAGTCATCACCACTGCTGCTGCTTTTAATG
AATCACTCTGGGAAGAAATCGGACGGGTGGTGTCTGATGAAGCAAGAGCA
ATGTACAACGGAGGAATGGCAGGTTTGACATATTGGAGCCCTAATGTAAA
CATATTTAGGGATCCAAGATGGGGCAGAGGCCAAGAGACGCCCGGCGAAG
ACCCGGTATTATCCGGAAAATATGCCGCCAGTTATGTCAGAGGACTCCAG
GGTAACACCGGCAGTAGGCTCAAGGTCGCTGCATGTTGTAAACATTACAC
AGCCTATGATCTTGACAATTGGAATGGCGTGGATCGGTACCCATTTCAAT
GCT
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