CN188991

Overview
NameCN188991
Unique NameCN188991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.151e-59
Identity = 81/122 (66.39%), Postives = 100/122 (81.97%), Query Frame = 2
Query:  200 LRGPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            ++ PWKGRFWART+    +SGKFTC TADC +GQV CNGNGA PPASLVE  IAAN+G DF+D+SLVDG+NLP+SVA +GG+G  C  +SC+ANVNAVCP+ L +KGSD +V+AC SAC +F
Sbjct:   65 VQAPWKGRFWARTR-CTTNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAF 184          

HSP 2 Score: 72.4034 bits (176), Expect = 6.151e-59
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 1
Query:   10 MMNTRAIFCLTFS-FLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGF*LPSKAKKTLDVE 204
            MM T A++ LT + F +SGAH A ITFTNNC  TIWPG LT+D   QL   GF L SKA  TL V+
Sbjct:    1 MMKTLALYGLTLALFFLSGAHSAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQ 66          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.363e-58
Identity = 83/119 (69.75%), Postives = 98/119 (82.35%), Query Frame = 2
Query:  209 PWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            PW GRFW RT+ S D++GKFTC TADCGSGQV CNG GA PPA+LVE TIAAN GQD++D+SLVDGFNLP+SVAPQGG+G  C  SSC ANVN VCP+ L +K +DG+VI+C SAC +F
Sbjct:   70 PWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAF 187          

HSP 2 Score: 66.2402 bits (160), Expect = 1.363e-58
Identity = 35/66 (53.03%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   37 LTFSFLI-SGAHLATITFTNNCQNTIWPGALTADGGAQLSENGF*LPSKAKKTLDVEGALERPFLG 231
            LT + L  SGAH A ITFTNNC NT+WPG LT D   QLS  GF L SKA +++D        F G
Sbjct:   12 LTLAILFFSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWG 77          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.238e-56
Identity = 85/119 (71.43%), Postives = 102/119 (85.71%), Query Frame = 2
Query:  209 PWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            PW GRF+ RT+ S D+SGKFTCATADCGSGQV+CNGNGA PPA+LVE TIA+N GQDF+D+SLVDGFNLP+SVAPQGG+G  C  S+C A++N VCP+ L +KGSDG+VIAC SAC +F
Sbjct:   70 PWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTG-KCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAF 187          

HSP 2 Score: 55.4546 bits (132), Expect = 1.238e-56
Identity = 27/58 (46.55%), Postives = 32/58 (55.17%), Query Frame = 1
Query:   58 SGAHLATITFTNNCQNTIWPGALTADGGAQLSENGF*LPSKAKKTLDVEGALERPFLG 231
            SGAH A ITFTN C  T+WPG LT D   QLS  GF L +   +++D        F G
Sbjct:   20 SGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFG 77          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.290e-55
Identity = 86/119 (72.27%), Postives = 95/119 (79.83%), Query Frame = 2
Query:  209 PWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            PW GRFWART  S D+SGKF CATADC SGQV CNGNGA PPA+L EF I A  GQDF+D+SLVDGFNLP+SV PQGG+G  C T+SC ANVNAVCPS L  KGSDG+V+AC SAC  F
Sbjct:   69 PWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-DCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKF 186          

HSP 2 Score: 54.6842 bits (130), Expect = 2.290e-55
Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 1
Query:   10 MMNTRAIFCLTFSFLI---SGAHLATITFTNNCQNTIWPGALTADGGAQLSENGF*LPSKAKKTLD 198
            MM T  +  L+ S  I    GAH ATI+F NNC   +WPG LT+D   QLS  GF L S+A   LD
Sbjct:    1 MMKTLVVV-LSLSLTILSFGGAHAATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLD 65          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.530e-50
Identity = 81/119 (68.07%), Postives = 91/119 (76.47%), Query Frame = 2
Query:  209 PWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            PW GRFWART+ S D+SGKF C TADC SGQ+ CNG    PPA+L EFTIAA  GQDF+D+SLVDGFNLP+SV PQGG+G TC   SC ANVN VCPS L   GSDG+V+AC SAC  F
Sbjct:   66 PWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-TCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKF 183          

HSP 2 Score: 47.7506 bits (112), Expect = 4.530e-50
Identity = 27/64 (42.19%), Postives = 35/64 (54.69%), Query Frame = 1
Query:   10 MMNTRAIFCLTFSFL-ISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGF*LPSKAKKTLD 198
            M    A+  L+ + L   GAH AT++F NNC  T+WP +    G  QLS  GF L S+A   LD
Sbjct:    2 MKTLGAVLSLSLTLLSFGGAHAATMSFKNNCPYTVWPASF---GNPQLSTTGFELASQASFQLD 62          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.902e-49
Identity = 81/119 (68.07%), Postives = 97/119 (81.51%), Query Frame = 2
Query:  209 PWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            PW GRFW RT+ S D++GKF+C TADCGSGQV CNG GA PPA+LVE TIAAN GQD++D+SLVDGFNLP+SVAPQGG+G  C  SSC ANVN  CP+ L +K +DG+VI+C SAC +F
Sbjct:   36 PWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAF 153          

HSP 2 Score: 38.1206 bits (87), Expect = 2.902e-49
Identity = 19/43 (44.19%), Postives = 23/43 (53.49%), Query Frame = 1
Query:  103 NTIWPGALTADGGAQLSENGF*LPSKAKKTLDVEGALERPFLG 231
            NT+WPG LT D   QLS   F L SKA +++D        F G
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWG 43          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.893e-43
Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = 2
Query:  200 LRGPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSAC 556
            ++ PW GRFW R+  S DSSGKF C+T DCGSGQ++CNG GA+PPASLVE T+A N GQDF+D+SLVDGFNLP+ +AP+GGSG  C ++SC AN+N VCP+ L+ KGSDG+VI C SAC
Sbjct:   65 VQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSG-DCNSTSCAANINTVCPAELSDKGSDGSVIGCKSAC 182          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.184e-31
Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 2
Query:  212 WKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            W GRFWART  + D+SG   C T DCG   + CNG G  PP +L EFT+  + G+DF+D+SLVDG+N+ L + P GGSG  C  + C +++NA CP  L +     NV+AC SAC  F
Sbjct:   69 WSGRFWARTGCNFDASGNGRCVTGDCGG--LRCNGGGV-PPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSG-DCKYAGCVSDLNAACPDMLKVM-DQNNVVACKSACERF 181          

HSP 2 Score: 38.1206 bits (87), Expect = 3.184e-31
Identity = 24/64 (37.50%), Postives = 31/64 (48.44%), Query Frame = 1
Query:   10 MMNTRAIFCLTFSFLISGAHLATITFT--NNCQNTIWPGALTADGGAQLSENGF*LPSKAKKTL 195
            M N  +I  L   F+ SG  +    FT  NNC  T+W G L A  G +L + GF L   A + L
Sbjct:    1 MANISSIHILFLVFITSGIAVMATDFTLRNNCPTTVWAGTL-AGQGPKLGDGGFELTPGASRQL 63          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.693e-26
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  212 WKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAAN-KGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSAC 556
            W GR W R   S DS G+ +CAT DCG G + CNG     PA++VE T+  +     F+D+SLVDGFN P+S+A  GG G  C T++C A+VN  CPS L ++  +G V  C SAC
Sbjct:   75 WSGRVWPRRGCSFDSRGRGSCATGDCG-GVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGG-GVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSAC 188          

HSP 2 Score: 29.261 bits (64), Expect = 2.693e-26
Identity = 13/41 (31.71%), Postives = 19/41 (46.34%), Query Frame = 1
Query:   79 ITFTNNCQNTIWPGALTADGGAQLSENGF*LPSKAKKTLDV 201
            +   NNC  ++WPG L   G       GF L +  +  L+V
Sbjct:   31 LIMVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEV 71          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.507e-24
Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = 2
Query:  176 PKQKKLSMLRGP-WKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDG-NVIACNSACASF 565
            P  K  S+   P W GRFW R   + D SG+  CAT DCG G ++CNG G  PPA+L E T+      DF+D+SLVDG+NL +S+ P  GSG  C+ + C +++N +CP  L ++  +G  V+AC SAC++F
Sbjct:   54 PANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCG-GSLSCNGAGGEPPATLAEITLGPE--LDFYDVSLVDGYNLAMSIMPVKGSG-QCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAF 181          
The following BLAST results are available for this feature:
BLAST of CN188991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TLP1_CASSA6.151e-5966.39Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TP1A_MALDO1.363e-5869.75Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_PRUPE1.238e-5671.43Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP_PRUAV2.290e-5572.27Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP2_PRUPE4.530e-5068.07Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TP1B_MALDO2.902e-4968.07Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP1_PYRPY1.893e-4365.55Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
PR5_ARATH3.184e-3148.31Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLPH_ORYSJ2.693e-2647.41Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLPH_ARATH1.507e-2444.70Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188991 ID=CN188991; Name=CN188991; organism=Citrus sinensis; type=EST; length=565bp
TCAGCTTTCATGATGAATACCCGAGCAATATTTTGCCTTACCTTCTCCTT
CCTCATCTCTGGGGCGCACTTGGCAACGATTACGTTCACAAACAACTGCC
AAAACACTATTTGGCCGGGAGCCCTAACCGCAGATGGAGGTGCTCAGCTG
TCAGAAAATGGGTTCTAGTTACCATCCAAAGCAAAAAAAACTCTCGATGT
TGAGGGGGCCTTGGAAAGGCCGTTTCTGGGCTCGAACACAGTGATCTAAA
GATTCCTCCGGCAAGTTCACTTGCGCCACTGCAGATTGTGGCTCAGGCCA
AGTCACATGCAACGGTAATGGTGCAACCCCACCGGCATCTCTCGTGGAAT
TCACAATTGCTGCAAACAAAGGACAAGATTTCTTCGATCTTAGCCTCGTT
GATGGCTTTAACTTGCCTCTTTCAGTTGCCCCACAAGGCGGTTCTGGAGC
TACTTGCACGACATCTAGCTGTAAAGCCAACGTGAATGCTGTTTGTCCAT
CATAGCTAGCAATCAAAGGATCCGATGGGAATGTTATTGCTTGCAACAGT
GCATGTGCATCTTTT
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