CN188981

Overview
NameCN188981
Unique NameCN188981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13203 contig Csv1_Contig13203:57..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.229e-59
Identity = 99/174 (56.90%), Postives = 138/174 (79.31%), Query Frame = -3
Query:  184 SKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 705
            SKH +WQERAR+EVLQ FG NKP+++ LNHLK V MILYEVLRLYPPV  L++ V K+TKLG+ T+PAG Q+ LP +++H++  +WG+DA+EF P RF +G++ A KN V+Y PF+ GPR+C+GQNFAL++AK+   MILQ + F+++PSYVHAP  + T+ P+ G+ +I +KL
Sbjct:  349 SKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHVIYKKL 522          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 55/145 (37.93%), Postives = 88/145 (60.69%), Query Frame = -3
Query:  268 HQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 699
            H D Q++ ++E+   F N  P  YD L  ++ + M++ E LRLYP    L RA  K+ ++  + +P G  + +P+ ++H+DP+LW  +  EF+PERF++   K   N  +Y PF  GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  324 HPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW-PEPEEFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24
Identity = 57/151 (37.75%), Postives = 92/151 (60.93%), Query Frame = -3
Query:  250 HQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYV 699
            H + Q++ ++EV +   + +  +D L+ LK ++ ++ E LRLYP  +++ +R  LK T +  + + AG  I +    +H DP++WGDD  EFKPER+  G  +    +  Y PF +GPRIC+G   A++E KM  T IL+NY+FE +P  V
Sbjct:  345 HPEIQKKLQEEVDRECPDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTPETV 494          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.845e-24
Identity = 53/141 (37.59%), Postives = 89/141 (63.12%), Query Frame = -3
Query:  268 QERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 687
            QE+  +E+ + FG ++ +++ L  LK +  ++ E LRLYP  ++  SR  +K T +  + + AGV + +    +H DPELWG+D  EFKPER++    +  +++ +Y PF LGPR C+G   A++E K+  T +L+NY+FE
Sbjct:  346 QEKVIEEIAREFGTSEVEFEKLGRLKYMDCVIKEALRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWS--TDEPLEHKGAYLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTFE 484          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.390e-23
Identity = 51/145 (35.17%), Postives = 89/145 (61.38%), Query Frame = -3
Query:  268 HQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 699
            H D Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H+DP+LW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A   +LQN+SF+
Sbjct:  324 HPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLW-PEPEEFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFK 466          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22
Identity = 52/145 (35.86%), Postives = 87/145 (60.00%), Query Frame = -3
Query:  268 HQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 699
            H   Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +T+P G  + +P+ ++H +PELW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A   ILQN+SF+
Sbjct:  324 HPHVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELW-PEPEEFRPERFSKN-NKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22
Identity = 53/144 (36.81%), Postives = 85/144 (59.03%), Query Frame = -3
Query:  271 HQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSF 699
            H D Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H +PE W  +  EF+PERF++  +K   N   Y PF  GPR CVG  FAL+  K+A   ILQN+SF
Sbjct:   35 HPDVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFW-PEPEEFRPERFSKK-NKDGINPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSF 176          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22
Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = -3
Query:  268 HQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 699
            H D Q++ ++E+   F N   P YD L  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P   +H+D  LW  +  EF+PERF+   +K + N  +Y PF  GPR C+G  FA++  K+A   +LQN+SF+
Sbjct:  324 HPDVQQKLQEEIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLW-PEPEEFRPERFSRK-NKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFK 466          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: C13A5_CAEEL (Putative cytochrome P450 CYP13A5 OS=Caenorhabditis elegans GN=cyp-13A5 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 51/149 (34.23%), Postives = 92/149 (61.74%), Query Frame = -3
Query:  262 SKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELS 705
            ++H + Q++ ++EV +   N +  +D ++ LK ++ ++ E LR+YP  +++ +R  +KET +  + +  G  + +    +H DP++WG+DA EF+PER+  G  +    +  Y PF +GPRIC+G   A++E KM  T IL+ Y+FE S
Sbjct:  343 ARHPEIQKKLQEEVDRECPNPEVTFDQISKLKYMECVVKEALRMYPLASIVHNRKCMKETNVLGVQIEKGTNVQVDTWTLHYDPKVWGEDANEFRPERWESG-DELFYAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFETS 490          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22
Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = -3
Query:  268 HQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 699
            H D Q++ + E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W +   EF+PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A T I+QN+SF+
Sbjct:  325 HPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPE-EFQPERFSKE-NKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQ 467          
The following BLAST results are available for this feature:
BLAST of CN188981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
C72A1_CATRO2.229e-5956.90Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
CP3AT_PIG2.328e-2437.93Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
C13A7_CAEEL6.773e-2437.75Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
C13A2_CAEEL8.845e-2437.59Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]
CP3AO_SHEEP4.390e-2335.17Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP3AS_BOVIN1.668e-2235.86Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP3AJ_CAPAE1.668e-2236.81Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP3AC_CANFA1.668e-2236.55Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
C13A5_CAEEL4.854e-2234.23Putative cytochrome P450 CYP13A5 OS=Caenorhabditis... [more]
CP3AB_MOUSE8.279e-2236.55Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188981 ID=CN188981; Name=CN188981; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTTTTTTTTTGCACCAAATATTGTACAATATTATTATAATACA
GTACTAATGCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTA
AATACATTAAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATC
TTATAGTTGCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCA
ATTGGGTACCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGG
ACATAGGATGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGT
GGCCATTTTTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAG
GACCCAATGCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAA
ATTCCTTCCGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCA
AAGTTCAGGATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCC
CAGCGGGTAATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGA
CTAAGCATAGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCAT
CTGGACAATTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGC
CAAACACTTGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGC
TTGCTCA
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