CN188970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.557e-41 Identity = 93/139 (66.91%), Postives = 102/139 (73.38%), Query Frame = -1 Query: 266 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 682 LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD L +LQ KE L+EAN+TLKQR LMEG +N LQ +A+D GYG + Q QGD FFH LECEPTLQIGYQ DPI+V AGPS+NNYM GWLP Sbjct: 118 LGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQR-------------LMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPSVNNYMAGWLP 241
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.227e-40 Identity = 89/142 (62.68%), Postives = 100/142 (70.42%), Query Frame = -1 Query: 266 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGL-KPAQPQGDSFFHA--LECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 682 LGPL+SK+LE+LERQLD SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG GD F +ECEPTLQIGY DP SVVTAGPS+NNYM GWLP Sbjct: 120 LGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR--------------MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMNNYMGGWLP 247
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.525e-30 Identity = 78/142 (54.93%), Postives = 95/142 (66.90%), Query Frame = -1 Query: 266 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 682 LGPL++KELESLERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ L+L +GYQ+ LQLNP+ E+ YG Q Q +FF LECEP LQIGYQ + AGPS+NNYM GWLP Sbjct: 120 LGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLR-------------LRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPSVNNYMLGWLP 245
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.525e-30 Identity = 77/141 (54.61%), Postives = 93/141 (65.96%), Query Frame = -1 Query: 269 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYM-QGWL 682 LGPL SKELE LERQLD SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R E Q N Q+ +PS GYG +PAQ G++F+H LECEPTLQIGY ++ TA ++NNYM GWL Sbjct: 116 LGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRR-------------FEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATAS-TVNNYMPPGWL 242
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.246e-29 Identity = 78/144 (54.17%), Postives = 94/144 (65.28%), Query Frame = -1 Query: 266 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDS---FFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 682 LGPL++KELE LERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ L+L +GYQ+ LQLNP+ ED YG Q Q +S FF LECEP LQ+GYQ + AGPS NNYM GWLP Sbjct: 120 LGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLR-------------LRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPSENNYMLGWLP 248
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.668e-21 Identity = 52/76 (68.42%), Postives = 56/76 (73.68%), Query Frame = -1 Query: 455 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVN 682 LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD LT+ Q KE L+EAN+TLKQR LMEG Q+N Sbjct: 118 LGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQR-------------LMEGSQLN 180 HSP 2 Score: 31.187 bits (69), Expect = 1.668e-21 Identity = 16/31 (51.61%), Postives = 19/31 (61.29%), Query Frame = -2 Query: 343 VQKIVVMGLNQLNLRAIASFTPWNVNPHCKL 435 + K+ M QL LRA+ASF W VN CKL Sbjct: 186 MHKLWAMAGKQLKLRAMASFILWIVNLLCKL 216
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20 Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = -1 Query: 269 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR---TMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 682 LGPLNSKELE LERQLD SLKQ+R +TQYMLD L++LQ KE +L +AN+ L + + +RH G G++ ++ YG A QG + +LEC+PTLQIGY ++ ++V G S N Y+ GW+ Sbjct: 117 LGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGG-----GWE------GGDQQNIAYGHPQAHSQG--LYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQGNGYIPGWM 249
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.235e-19 Identity = 63/146 (43.15%), Postives = 82/146 (56.16%), Query Frame = -1 Query: 269 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR---TMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 682 LGPLNSKELE LERQLD SLKQ+RS +TQYMLD L++LQ+KEQ+L E N+ L + + +R G EG + N Y AQ QG + LEC PTLQ+GY ++ I+ T + N Y+ GW+ Sbjct: 117 LGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGGGGWEGGEQNVT----------YAHHQAQSQG--LYQPLECNPTLQMGYDNPVCSEQITATTQAQAQQGNGYIPGWM 250
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.107e-19 Identity = 61/142 (42.96%), Postives = 85/142 (59.86%), Query Frame = -1 Query: 266 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 682 L L KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++ H G Q+ E G + + P + +G G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 119 LDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249
BLAST of CN188970 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.107e-19 Identity = 61/142 (42.96%), Postives = 85/142 (59.86%), Query Frame = -1 Query: 266 LGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 682 L L KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++ H G Q+ E G + + P + +G G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 119 LDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249 The following BLAST results are available for this feature:
BLAST of CN188970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188970 ID=CN188970; Name=CN188970; organism=Citrus sinensis; type=EST; length=682bpback to top |