CN188947
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2) HSP 1 Score: 372.859 bits (956), Expect = 1.022e-102 Identity = 180/214 (84.11%), Postives = 199/214 (92.99%), Query Frame = 3 Query: 6 YPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMPPGDASQ 647 +PS SVLIPALRTVGNIVTGDDMQTQCVI++QALPCLLNLL+ N+KKSIKKEACWT+SNITAGNREQIQAVI ANII PLV LL+ AEFDIKKEAAWAISNATSGGTH+QIK+LV QGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLG DVN + QMIDDAEGLEKIE+LQ+HDN EIYEK+VK+LE+YWL++ED+ MP GD +Q Sbjct: 301 HPSASVLIPALRTVGNIVTGDDMQTQCVIDHQALPCLLNLLTNNHKKSIKKEACWTISNITAGNREQIQAVINANIIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKYLVAQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGAGDVNSYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKMLESYWLEEEDDAMPSGDNAQ 514
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=2 SV=2) HSP 1 Score: 352.058 bits (902), Expect = 1.866e-96 Identity = 173/216 (80.09%), Postives = 198/216 (91.67%), Query Frame = 3 Query: 12 SPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNT-DVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE--TMPPG-DASQ 647 SPSVLIPALRTVGNIVTGDD+QTQCVI ALPCL NLL+ N+KKSIKKEACWT+SNITAGN++QIQ V+EAN+I PLV+LL+NAEFDIKKEAAWAISNATSGG+H+QIK+LV QGCIKPLCDLLVCPDPRI+TVCLEGLENILKVGEAEKNLG+T D+N + Q+IDDAEGLEKIE+LQ+HDN EIYEK+VK+LETYWL++ED+ PPG D SQ Sbjct: 297 SPSVLIPALRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNITAGNKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCLEGLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDDETQQPPGVDGSQ 512
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA1A_ORYSJ (Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2) HSP 1 Score: 347.821 bits (891), Expect = 3.520e-95 Identity = 166/207 (80.19%), Postives = 191/207 (92.27%), Query Frame = 3 Query: 6 YPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETM 626 +PSPSVLIPALRTVGNIVTGDD QTQC+I++QALPCLL+LL+ N KKSIKKEACWT+SNITAGN++QIQAVI A IIGPLV LL+ AEFDIKKEAAWAISNATSGG+H+QIK+LV +GCIKPLCDLL+CPD RIVTVCLEGLENILKVGE +K L DVNVF+QMID+AEGLEKIE+LQ+HDN EIYEK+VK+LE YW+D+ED+TM Sbjct: 295 HPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYWMDEEDDTM 501
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA_SOLLC (Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2) HSP 1 Score: 345.895 bits (886), Expect = 1.338e-94 Identity = 167/205 (81.46%), Postives = 191/205 (93.17%), Query Frame = 3 Query: 6 YPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTD-VNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDED 617 + SPSVLIPALRTVGNIVTGDD+QTQ +I++ ALPCL+NLL+ NYKKSIKKEACWT+SNITAGNR QIQ VIEA II PLV LL+NAEF+IKKEAAWAISNATSGG H+QIKFLV QGCIKPLCDLLVCPDPRIVTVCLEGLENILK+GEA+K+LGNT+ VNV+ Q+ID+AEGLEKIE+LQ+HDN EIYEK+VK+LETYWL++ED Sbjct: 296 HSSPSVLIPALRTVGNIVTGDDIQTQVMIDHHALPCLVNLLTQNYKKSIKKEACWTISNITAGNRNQIQIVIEAGIIAPLVYLLQNAEFEIKKEAAWAISNATSGGNHDQIKFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKIGEADKDLGNTEGVNVYAQLIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEED 500
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2) HSP 1 Score: 322.398 bits (825), Expect = 1.584e-87 Identity = 154/207 (74.40%), Postives = 185/207 (89.37%), Query Frame = 3 Query: 3 GYPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNT-DVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE 620 G+ SPSVLIPALRT+GNIVTGDD+QTQ V++ QALPCLLNLL NYKKSIKKEACWT+SNITAGN +QIQAVI+A II LV +L++AEF++KKEAAW ISNATSGGTH+QIKF+V QGCIKPLCDLL CPD ++VTVCLE LENIL VGEAEKNLG+T + N++ QMID+AEGLEKIE+LQ+HDN +IY+K+VK+LET+W +D +E Sbjct: 297 GHSSPSVLIPALRTIGNIVTGDDLQTQMVLDQQALPCLLNLLKNNYKKSIKKEACWTISNITAGNADQIQAVIDAGIIQSLVWVLQSAEFEVKKEAAWGISNATSGGTHDQIKFMVSQGCIKPLCDLLTCPDLKVVTVCLEALENILVVGEAEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHDNNDIYDKAVKILETFWTEDNEE 503
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA7_MOUSE (Importin subunit alpha-7 OS=Mus musculus GN=Kpna6 PE=1 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 5.481e-64 Identity = 123/205 (60.00%), Postives = 159/205 (77.56%), Query Frame = 3 Query: 21 VLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 632 V PALR VGNIVTGDD+QTQ ++ ALPCLL+LLS + K+SI+KEACWT+SNITAGNR QIQAVI+ANI L+ +L+ AEF +KEAAWAI+NATSGGT EQI++LV GCIKPLCDLL D +IV V L GLENIL++GE E + VN + +I++A GL+KIE LQ+H+N EIY+K+ L+E Y+ ++D+D ++ P Sbjct: 310 VASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSS-KESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQESKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAP 513
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA7_BOVIN (Importin subunit alpha-7 OS=Bos taurus GN=KPNA6 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.349e-64 Identity = 123/205 (60.00%), Postives = 159/205 (77.56%), Query Frame = 3 Query: 21 VLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 632 V PALR VGNIVTGDD+QTQ ++ ALPCLL+LLS + K+SI+KEACWT+SNITAGNR QIQAVI+ANI L+ +L+ AEF +KEAAWAI+NATSGGT EQI++LV GCIKPLCDLL D +IV V L GLENIL++GE E + VN + +I++A GL+KIE LQ+H+N EIY+K+ L+E Y+ ++D+D ++ P Sbjct: 310 VASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSS-KESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAP 513
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA7_PONAB (Importin subunit alpha-7 OS=Pongo abelii GN=KPNA6 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.083e-63 Identity = 123/205 (60.00%), Postives = 158/205 (77.07%), Query Frame = 3 Query: 21 VLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 632 V PALR VGNIVTGDD+QTQ ++ ALPCLL+LLS K+SI+KEACWT+SNITAGNR QIQAVI+ANI L+ +L+ AEF +KEAAWAI+NATSGGT EQI++LV GCIKPLCDLL D +IV V L GLENIL++GE E + VN + +I++A GL+KIE LQ+H+N EIY+K+ L+E Y+ ++D+D ++ P Sbjct: 310 VASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSP-KESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAP 513
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA7_HUMAN (Importin subunit alpha-7 OS=Homo sapiens GN=KPNA6 PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.083e-63 Identity = 123/205 (60.00%), Postives = 158/205 (77.07%), Query Frame = 3 Query: 21 VLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 632 V PALR VGNIVTGDD+QTQ ++ ALPCLL+LLS K+SI+KEACWT+SNITAGNR QIQAVI+ANI L+ +L+ AEF +KEAAWAI+NATSGGT EQI++LV GCIKPLCDLL D +IV V L GLENIL++GE E + VN + +I++A GL+KIE LQ+H+N EIY+K+ L+E Y+ ++D+D ++ P Sbjct: 310 VASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSP-KESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAP 513
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA5_HUMAN (Importin subunit alpha-6 OS=Homo sapiens GN=KPNA5 PE=1 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 2.720e-63 Identity = 125/211 (59.24%), Postives = 159/211 (75.36%), Query Frame = 3 Query: 21 VLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE--TMPPGDASQ 647 V+ PALR VGNIVTGDD+QTQ ++ ALPCLL+LLS K+SI+KEACWTVSNITAGNR QIQAVI+ANI L+ +L+ AEF +KEAAWAI+NATSGGT EQI++LV GCIKPLCDLL D +IV V L GLENIL++GE E +N + +I++A GL+KIE LQ+H+N EIY+K+ L+E Y+ +ED+ +P D +Q Sbjct: 310 VVSPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSP-KESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQESKQNGIGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEEDDPSIVPQVDENQ 519 The following BLAST results are available for this feature:
BLAST of CN188947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188947 ID=CN188947; Name=CN188947; organism=Citrus sinensis; type=EST; length=737bpback to top |