CN188946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188946 vs. ExPASy Swiss-Prot
Match: IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.507e-22 Identity = 48/66 (72.73%), Postives = 58/66 (87.88%), Query Frame = -1 Query: 570 GEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMPPGDASQ 767 GEAEKNLG DVN + QMIDDAEGLEKIE+LQ+HDN EIYEK+VK+LE+YWL++ED+ MP GD +Q Sbjct: 449 GEAEKNLGAGDVNSYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKMLESYWLEEEDDAMPSGDNAQ 514
BLAST of CN188946 vs. ExPASy Swiss-Prot
Match: IMA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19 Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = -1 Query: 570 GEAEKNLGNT-DVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE--TMPPG-DASQ 767 GEAEKNLG+T D+N + Q+IDDAEGLEKIE+LQ+HDN EIYEK+VK+LETYWL++ED+ PPG D SQ Sbjct: 443 GEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDDETQQPPGVDGSQ 512
BLAST of CN188946 vs. ExPASy Swiss-Prot
Match: IMA1A_ORYSJ (Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 9.860e-19 Identity = 42/59 (71.19%), Postives = 52/59 (88.14%), Query Frame = -1 Query: 591 GEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETM 767 GE +K L DVNVF+QMID+AEGLEKIE+LQ+HDN EIYEK+VK+LE YW+D+ED+TM Sbjct: 443 GETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYWMDEEDDTM 501
BLAST of CN188946 vs. ExPASy Swiss-Prot
Match: IMA_SOLLC (Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.869e-18 Identity = 42/57 (73.68%), Postives = 54/57 (94.74%), Query Frame = -1 Query: 600 GEAEKNLGNTD-VNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDED 767 GEA+K+LGNT+ VNV+ Q+ID+AEGLEKIE+LQ+HDN EIYEK+VK+LETYWL++ED Sbjct: 444 GEADKDLGNTEGVNVYAQLIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEED 500
BLAST of CN188946 vs. ExPASy Swiss-Prot
Match: IMA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16 Identity = 38/58 (65.52%), Postives = 52/58 (89.66%), Query Frame = -1 Query: 597 GEAEKNLGNT-DVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE 767 GEAEKNLG+T + N++ QMID+AEGLEKIE+LQ+HDN +IY+K+VK+LET+W +D +E Sbjct: 446 GEAEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHDNNDIYDKAVKILETFWTEDNEE 503 The following BLAST results are available for this feature:
BLAST of CN188946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188946 ID=CN188946; Name=CN188946; organism=Citrus sinensis; type=EST; length=767bpback to top |