CN188933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188933 vs. ExPASy Swiss-Prot
Match: UBP12_ARATH (Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=2 SV=2) HSP 1 Score: 322.013 bits (824), Expect = 1.744e-87 Identity = 160/223 (71.75%), Postives = 176/223 (78.92%), Query Frame = 3 Query: 3 EDLAEQIGRDIYFDLVDHDKVRSFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVGRLFLKSSSKPIEILRKLNQMAGXXXXXXXXXXXXXXXXXCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLESEQECRYPDVPSFLE 671 EDL EQIG+DIYFDLVDHDKVRSFR+QKQT F FKEE+AKEFG+P+QLQRFWIWAKRQNHTYRPNRPL PQEE Q VGQ+RE SNK +TAEL+LFLEVE DL PI PP+KSK+DILLFFKLYDPEK L Y GRL +KSSSKP++I KLN+M G CVMCEHLDK+TSFRL QIEDGDIICFQK P + E EC YP VPSFLE Sbjct: 576 EDLKEQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVEH-LDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-PLVNKEIECLYPAVPSFLE 796
BLAST of CN188933 vs. ExPASy Swiss-Prot
Match: UBP13_ARATH (Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana GN=UBP13 PE=1 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 9.570e-86 Identity = 152/223 (68.16%), Postives = 178/223 (79.82%), Query Frame = 3 Query: 3 EDLAEQIGRDIYFDLVDHDKVRSFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVGRLFLKSSSKPIEILRKLNQMAGXXXXXXXXXXXXXXXXXCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLESEQECRYPDVPSFLE 671 +D+ EQIG++IYFDLVDH+KVRSFR+QKQT F FKEE+AKEFG+P+QLQRFWIWAKRQNHTYRPNRPL P EE QTVGQ+RE SNK + AEL+LFLE+E GPD PI PP+K+ +DILLFFKLYDPE LRYVGRL +KSSSKP++I+ +LN+MAG CVMCE +DK+TSFRL QIEDGDIIC+QK +E E E RYPDVPSFLE Sbjct: 574 DDITEQIGKNIYFDLVDHEKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASNKANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKPMDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPLSIE-ESEFRYPDVPSFLE 795
BLAST of CN188933 vs. ExPASy Swiss-Prot
Match: UBP7_RAT (Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus GN=Usp7 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 58/204 (28.43%), Postives = 85/204 (41.67%), Query Frame = 3 Query: 42 DLVDHDKVRS--FRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAP--PDKSKD-DILLFFKLYDPEKGELRYVGRLFLKSSSKPIEILRKLNQMAGXXXXXXXXXXXXXXXXXCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLESEQE 638 D+ D +KVR F+V K +S F + +++ G P R W R N T RP + EA + E+S+ + +FLE P+L P KD D++LF K+YDP+ L Y G ++ S K ++L + AG + D L ++ DGDII FQK P E Sbjct: 583 DMYDEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGT---KRPAMLDNEADGSKTMIELSDNENP--WTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDPENDNSE 780
BLAST of CN188933 vs. ExPASy Swiss-Prot
Match: UBP7_MOUSE (Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 58/204 (28.43%), Postives = 85/204 (41.67%), Query Frame = 3 Query: 42 DLVDHDKVRS--FRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAP--PDKSKD-DILLFFKLYDPEKGELRYVGRLFLKSSSKPIEILRKLNQMAGXXXXXXXXXXXXXXXXXCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLESEQE 638 D+ D +KVR F+V K +S F + +++ G P R W R N T RP + EA + E+S+ + +FLE P+L P KD D++LF K+YDP+ L Y G ++ S K ++L + AG + D L ++ DGDII FQK P E Sbjct: 583 DMYDEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGT---KRPAMLDNEADGNKTMIELSDNENP--WTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDPENDNSE 780
BLAST of CN188933 vs. ExPASy Swiss-Prot
Match: UBP7_HUMAN (Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 57/204 (27.94%), Postives = 85/204 (41.67%), Query Frame = 3 Query: 42 DLVDHDKVRS--FRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAP--PDKSKD-DILLFFKLYDPEKGELRYVGRLFLKSSSKPIEILRKLNQMAGXXXXXXXXXXXXXXXXXCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLESEQE 638 D+ D +KV+ F+V K +S F + +++ G P R W R N T RP + EA + E+S+ + +FLE P+L P KD D++LF K+YDP+ L Y G ++ S K ++L + AG + D L ++ DGDII FQK P E Sbjct: 582 DMYDEEKVKYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGT---KRPAMLDNEADGNKTMIELSDNENP--WTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDPENDNSE 779 The following BLAST results are available for this feature:
BLAST of CN188933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188933 ID=CN188933; Name=CN188933; organism=Citrus sinensis; type=EST; length=673bpback to top |