CN182135
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.098e-43 Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFVGIDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLP
Sbjct: 57 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLP 118 HSP 2 Score: 68.5514 bits (166), Expect = 2.098e-43 Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TDENLLSQIKDGF GKDLVVSV AMGEE+I +LKDIGPK
Sbjct: 119 TDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.100e-43 Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NGNTKDDLRLP
Sbjct: 57 KCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLP 118 HSP 2 Score: 72.0182 bits (175), Expect = 2.100e-43 Identity = 36/41 (87.80%), Postives = 36/41 (87.80%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TDENLLS IKDGF GKDLVVSV AMGEEQINALKDIGPK
Sbjct: 119 TDENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum GN=EIF5A4 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.736e-43 Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NGNTKDDLRLP
Sbjct: 57 KCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLP 118 HSP 2 Score: 71.633 bits (174), Expect = 2.736e-43 Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD++LLSQIKDGF GKDLVVSV AMGEEQINALKDIGPK
Sbjct: 119 TDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 4.644e-43 Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLP
Sbjct: 57 KCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLP 118 HSP 2 Score: 69.3218 bits (168), Expect = 4.644e-43 Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TDENLL Q+KDGF+ GKDLVVSV AMGEEQINA+KD+G K
Sbjct: 119 TDENLLKQVKDGFQEGKDLVVSVMSAMGEEQINAVKDVGTK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.890e-43 Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLP
Sbjct: 57 KCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 118 HSP 2 Score: 68.9366 bits (167), Expect = 7.890e-43 Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD+NLL+QIKDGF GKDLVVSV AMGEEQI ALKDIGPK
Sbjct: 119 TDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum GN=EIF5A3 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.028e-42 Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLP
Sbjct: 57 KCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLP 118 HSP 2 Score: 68.1662 bits (165), Expect = 1.028e-42 Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TDE+LL Q+KDGF+ GKDLVVSV AMGEEQINA+KDIG K
Sbjct: 119 TDESLLKQVKDGFQEGKDLVVSVMSAMGEEQINAIKDIGTK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.863e-42 Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDL+LP
Sbjct: 57 KCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLP 118 HSP 2 Score: 65.4698 bits (158), Expect = 3.863e-42 Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD+ LL+QIKDGF GKDLVVSV AMGEEQI ALKDIGPK
Sbjct: 119 TDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 6.556e-42 Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIFNGKKLEDIVPSSHNCD+PHV RT+YQLIDISEDGFVSLLT +GNTKDDLRLP
Sbjct: 58 KCHFVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLP 119 HSP 2 Score: 69.3218 bits (168), Expect = 6.556e-42 Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TDE L++QIK+GFESGKDLVV+VQ AMGEEQI ALKD+GPK
Sbjct: 120 TDETLVAQIKEGFESGKDLVVTVQSAMGEEQICALKDVGPK 160
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.114e-41 Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NG+TKDDL+LP
Sbjct: 57 KCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLP 118 HSP 2 Score: 67.0106 bits (162), Expect = 1.114e-41 Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD++LL+QIKDGF GKDLVVSV AMGEEQI ALKDIGPK
Sbjct: 119 TDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.452e-41 Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLP
Sbjct: 57 KCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 118 HSP 2 Score: 62.7734 bits (151), Expect = 5.452e-41 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD+ LL+Q+KDGF GKDLV+SV AMGEEQI +KDIGPK
Sbjct: 119 TDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159 The following BLAST results are available for this feature:
BLAST of CN182135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182135 ID=CN182135; Name=CN182135; organism=Citrus sinensis; type=EST; length=596bpback to top |