CN182120

Overview
NameCN182120
Unique NameCN182120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN182120 vs. ExPASy Swiss-Prot
Match: U326_ARATH (UPF0326 protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = -2 
Query:  489 EKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLARLGFLCNCVLPAGLNETKV 674
            EKL+ +Y G+TYHLI KNCNHF  +VCL+LT KPIP W+NRLAR+G  CNC+LP  +  T V
Sbjct:  107 EKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINRLARVGSFCNCLLPESIQLTAV 168
The following BLAST results are available for this feature:
BLAST of CN182120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
U326_ARATH1.830e-1862.90UPF0326 protein At4g17486 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001P17_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001P17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182120 ID=CN182120; Name=CN182120; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTTTTTTTTTTTTAAAAAAGAAAAAAAAAAAGACATAATTATGCCA
TTTAAGTGGAAATAGAGCATTCTTTTTACAGGAAAACAGAAACGCTGCAA
CATTTTTCCAAGCAGCTGTTTCTACATTCATCAAAGAAATTTAGCAAGGC
AGGATCACCAGATGGGGCTGAAACAAAAACTCCCATATTTTTTTTTTTCC
CATCTTATGTTTGATATGTGAAAAATTCTAAATTTCTAAGAACTGTGGCA
ACCCAAAAAGCAATTAAAGCTTCAAGCTCAAGCTTGAAGTGGATGAACTA
TGCACCAAAGTCGAAGATGTCGGAATACAACGTCTTTGTCTACTACTACT
TCTCATTGCAGAAGCAGTTGGACAAGATGATAATTGTGGACGAGGTACAG
AATCAGATGACGACGAATACCTACTCGAATGGCTTCTCAATTTCTTCTTT
TCCCCCTCTGTAACTCTATCGTCTGATCTAACTTGCCGAACCTTTGTTTC
GTTCAAACCCGCTGGAAGAACACAGTTGCAGAGAAAACCCAAGCGAGCGA
GACGATTAACCCATCGAGGAATTGGTTTCCTAGTGAGCTTAAGACACACA
TCATTGCAGAAATGATTACAGTTCTTGGTGATTAGATGATACGTATTGCC
AGAATACTCCTCGGCGAGTTTTTCCCATAAACGCGCGCACTTC
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