CN188888

Overview
NameCN188888
Unique NameCN188888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1723..2429. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.252e-62
Identity = 117/135 (86.67%), Postives = 128/135 (94.81%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS+A KV+PEVIAE+TVR LQRT+PAAVPA+VFLSGGQSEEEAT NLNAMN+L TKKPWSLSFSFGRALQQSTLKAW+GK EN++KA+AAFL RCKANSEATLGTYKGDA LGEGA+ESLHVKDYKY
Sbjct:  224 LKPNMVTPGSDAKKVSPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.084e-61
Identity = 115/135 (85.19%), Postives = 127/135 (94.07%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS++PKV PEV+AEHTVRALQRT+PAAVPAVVFLSGGQSEEEAT NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW+GKEENV+ AQ A L R KANSEATLGTYKG++QLGEGA+ESLHVKDYKY
Sbjct:  225 LKPNMVTPGSDSPKVAPEVVAEHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.399e-59
Identity = 113/135 (83.70%), Postives = 122/135 (90.37%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS+APKV PEVIAEHTVRALQRT+PAAVPAVVFLSGGQSEEEA+ NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW GK ENV+ AQ A L R KANSEATLGTYKG + LG GA+ESLHVKDYKY
Sbjct:  225 LKPNMVTPGSDAPKVAPEVIAEHTVRALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.110e-58
Identity = 113/135 (83.70%), Postives = 122/135 (90.37%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS++ KVTPEVIAE+TVR LQRT+PAAVPAV+FLSGGQSEEEATRNLNAMN+L TKKPWSLSFSFGRALQ STLKAWAGK EN++KA+AAFL RCKANSEATLGTYKGDA       ESLHVKDYKY
Sbjct:  224 LKPNMVTPGSDSKKVTPEVIAEYTVRTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDA---AADTESLHVKDYKY 355          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.388e-53
Identity = 106/135 (78.52%), Postives = 117/135 (86.67%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPN+VTPGSE+ KVTPEVIAE+TVR LQRT+P AVP V+FLSGGQSEEEAT NLNAMN+L+TKKPW+LSFS+GRALQQSTLKAW GKEENV KAQ  FL R K NSEATLG Y+G A  G  A+ESLHVKDYKY
Sbjct:  224 LKPNIVTPGSESKKVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.696e-51
Identity = 101/135 (74.81%), Postives = 115/135 (85.19%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS++PKV+PEVI E+TV AL+RT+PAAVP +VFLSGGQSEE+AT NLNAMN+    KPW+LSFSFGRALQQSTLK W+GK+ENV KAQ  FL RCKANSEATLG Y G +  G  A+ESLHVKDYKY
Sbjct:  224 LKPNMVTPGSDSPKVSPEVIGEYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 9.015e-45
Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS++PKV PE+IAE+TV AL+RT+P A+P +VFLSG Q EE+AT NLNAMN+L   KPW+L+FSFG ALQQS +KAWAGK ENV KAQA FL RCKAN +ATLG Y G A     A E+L V  Y+Y
Sbjct:  224 LKPNMVTPGSDSPKVAPELIAEYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.476e-35
Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = -3
Query:  298 LKPNMVTPG-SEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG S A K + E I   TV AL+R +PAAVP + FLSGGQSE +AT NLNA+N ++  KPW L+FS+GRALQ S LKAW GK+EN+  AQ   L R KAN +A+LG Y G+   G  AAESL V  + Y
Sbjct:  232 LKPNMVTPGQSSASKASHEAIGLATVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAG-AAAESLFVAKHSY 366          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.884e-34
Identity = 77/136 (56.62%), Postives = 92/136 (67.65%), Query Frame = -3
Query:  298 LKPNMVTPG-SEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G S   K TP  +A  TV AL+RT+PAAVP + FLSGGQSEEEA+ NLNAMNQL   +PW LSFS+GRALQ S L AW G+  N + +Q AF+ R K NS A+ G YK   Q G+ + +SL    Y Y
Sbjct:  229 LKPNMVTAGHSCTKKYTPLEVAMATVTALRRTVPAAVPGICFLSGGQSEEEASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASKGEYKPSGQAGQASTQSLFTASYTY 364          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 144.821 bits (364), Expect = 4.198e-34
Identity = 73/136 (53.68%), Postives = 94/136 (69.12%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG   P K TPE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  229 LKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
The following BLAST results are available for this feature:
BLAST of CN188888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_ORYSJ1.252e-6286.67Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR3.084e-6185.19Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA8.399e-5983.70Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE7.110e-5883.70Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL1.388e-5378.52Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA1.696e-5174.81Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH9.015e-4566.67Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_CAEEL6.476e-3558.09Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALDOB_DANRE1.884e-3456.62Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALDOC_PANTR4.198e-3453.68Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P14_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188888 ID=CN188888; Name=CN188888; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTTAATAAGCACAAGAAAACATTATCAATCTCTTTG
ACAAAATCACAGAAATTTAGCGCCATTAGGGGAAAAGGAAAAAAAAAACA
AAAACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCA
AACCGAAGTTCCCAAGCTTTTTATTGCTCCACCTAATATGAAAAAGCCCT
AAAACTATGAATGAGAATGTGCCAACCTAATGTTCATACCGCCATTTACT
CTCATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTA
TTTGTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGG
CATCGCCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTG
ACAAGGAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCA
TGCCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTG
ACCATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTA
GCCTCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGC
TGCAGGCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACCT
CCGGTGTAACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTC
AAAA
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