CN182110

Overview
NameCN182110
Unique NameCN182110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN182110 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.941e-47
Identity = 92/127 (72.44%), Postives = 105/127 (82.68%), Query Frame = -2 
Query:  324 SLNVRWMLLGCVGETDEGLIAFSRGCPNLRKLEMRGCSFSEYALAAAVMQLTSLRYLWVQGYRASKDGRDILRMVRPFWNIELIPPRLVSDTDQLGNPIVIEHPAHILAYYSLAGQRTDFPETVRPL 704
            S NVRWMLLG VGE+DEGL+ FSRGCPNL+KLEMRGC FSE A+AAAV +L SLRYLWVQGYRAS  G+D+++M RP+WNIELIP R V + +Q G    +EHPAHILAYYSLAGQRTD P TVR L
Sbjct:  462 SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVL 588
The following BLAST results are available for this feature:
BLAST of CN182110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
COI1_ARATH1.941e-4772.44Coronatine-insensitive protein 1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001P12_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001P12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182110 ID=CN182110; Name=CN182110; organism=Citrus sinensis; type=EST; length=705bp
TTTTTTTTTTTTTTTTTCACGAAAATTTGCCCAACAGATTTAGTACCCAC
AACAGTGTCACCAACGCCTAATAATTTAAAGCTAATTTGCTAGGTACAAG
GAATGAGCCAGTATGGCATCAGAGTTCAGATGCTTGCAAACTACAGAAGA
AACCAAATTTATTACAGATCATTAGTTTAACCACGACACCAAACTAACCA
AGATTAAAAATTGAACCCTCTTAACAGAAAACCGAAAAAGTTATTGAACT
TATGAACACAGCGTGGAAACTTTAGAAAAGGTTTTTATGTACAGCTCTGC
ACGGAGAGCAAGGATTCTGTATCCAGCGGCCGAACAGTCTCTGGAAAATC
TGTTCTTTGTCCAGCAAGGGAGTAATATGCAAGTATATGAGCTGGATGCT
CGATCACTATCGGGTTTCCAAGCTGATCGGTATCAGAAACTAATCTAGGG
GGAATCAACTCGATATTCCAAAAAGGGCGAACCATTCTTAAAATATCACG
GCCATCTTTTGATGCTCGATAACCCTGCACCCATAAGTACCTCAGTGAGG
TCAGTTGCATCACGGCTGCTGCAAGTGCATACTCGCTGAAGGAACAACCC
CTCATTTCCAGTTTTCGCAGGTTAGGGCACCCTCTGGAAAACGCTATAAG
CCCCTCGTCAGTCTCACCGACGCAGCCCAAAAGCATCCATCTTACATTCA
GACTG
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