CN182101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.092e-44 Identity = 88/112 (78.57%), Postives = 94/112 (83.93%), Query Frame = 1 Query: 316 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAA 651 DVI LA TLA DGRRVHVIERDL+E DRIVGELLQPGGYLKLIELGLEDCV +IDAQRVFGYAL+ DG T++SYPLEKFHSDVAGR FHNGRFVQR+REKAA Sbjct: 76 DVIIVGAGVAGSALAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFVQRMREKAA 187
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.031e-28 Identity = 65/114 (57.02%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 316 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLE--KFHSDVAGRGFHNGRFVQRLREKAA 651 DVI LA LAKDGRRVHVIERDL EP+RI+GE +QPGG L L +LGLEDC+E IDAQ+ G ++KDG S+P++ F D + R FHNGRFVQRLR+KA+ Sbjct: 47 DVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKAS 160
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.296e-28 Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 247 DNGADSLRKTPTTALNGECPFDADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK-FHSDVAGRGFHNGRFVQRLREKAA 651 +N + K P A DADVI LA LAKDGRRVHVIERD+ EP R++GE +QPGG L L +LGLEDC+E ID Q G A++KDG + +S+P + F + GR F+NGRFVQRLR+KA+ Sbjct: 26 NNRRKKVAKLPDAATEVRRDGDADVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFVQRLRQKAS 161
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28 Identity = 64/113 (56.64%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 316 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLE-KFHSDVAGRGFHNGRFVQRLREKAA 651 DVI LA LAKDGRRVHVIERD+ EP R++GE +QPGG L L +LGL+DC+E+IDAQ+ G LFKDG T +P++ F + +GR FHNGRFVQRLR+KA+ Sbjct: 50 DVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFVQRLRQKAS 162
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.944e-27 Identity = 61/114 (53.51%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 313 ADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLE--KFHSDVAGRGFHNGRFVQRLREKA 648 ADVI LA LAKDGRRVHVIERD+ EP+R++GE +QPGG L L +LGL+DC+E IDAQ+ G A++KDG +P++ F + + R FHNGRFVQ+LR KA Sbjct: 46 ADVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRKA 159
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.294e-25 Identity = 61/113 (53.98%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 316 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK-FHSDVAGRGFHNGRFVQRLREKAA 651 DVI LA LAKDGRRVHVIERDL EP R +GEL+Q GG L +LGLEDC+E IDAQ A++KDG + +P +K F + GR NGR VQRLR+KAA Sbjct: 45 DVIIVGAGVAGASLAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAA 157
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.155e-22 Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 310 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL--FKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKA 648 D +VI LA L++DGR+V VIERDL EPDRIVGELLQPGGY L ELGL D VE ++A + GY + ++ + QI YPL + + +G FH+GRF+ LR+ A Sbjct: 121 DPEVIIVGSGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGYIVHDYESRSEVQIPYPLSETNQVQSGIAFHHGRFIMSLRKAA 235
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 9.345e-22 Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 310 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRT--QISYPLEKFHSDVAGRGFHNGRFVQRLREKA 648 D +VI L L++DGR+V VIERDL EPDRIVGE LQPGGY L +LGL D VE +DAQ V GY + +++ QI YPL + + +GR FH+GRF+ LR+ A Sbjct: 123 DPEVIIVGAGVLGSALVAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRKAA 237
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.638e-21 Identity = 57/141 (40.43%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 232 RSKSEDNGADSLRKTPTTALNGECPFDADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRT--QISYPLEKFHSDVAGRGFHNGRFVQRLREKA 648 R + E N +++ T+++ D +VI LA L++DGR V VIERDL EPDRI+GE LQPGGY L ELGL D VE ++A + GY + +R+ QI YP+ + + +G FH+G+F+ LR+ A Sbjct: 96 RRRKEVNLSETTLTGAATSVSTSSVTDPEVIIIGSGVLGSALATVLSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVIHDCESRSEVQIPYPVSENNQVQSGVAFHHGKFIMSLRKAA 236
BLAST of CN182101 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.746e-20 Identity = 51/111 (45.95%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 310 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLRE 642 DAD+I L L + GR+V V+ERD+SEPDRIVGELLQPGG L ++G+ D VE ID Q GY +F + + YP + G GFH GRFV LR+ Sbjct: 5 DADIIIIGAGITGCALGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQIFYGDSNVSVPYPSKPNGGAYQGIGFHYGRFVMNLRK 115 The following BLAST results are available for this feature:
BLAST of CN182101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182101 ID=CN182101; Name=CN182101; organism=Citrus sinensis; type=EST; length=651bpback to top |