CN188878

Overview
NameCN188878
Unique NameCN188878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2619 contig Csv1_Contig2619:480..1243. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_MICAN (Acetylglutamate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=argB PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.530e-64
Identity = 126/210 (60.00%), Postives = 159/210 (75.71%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIEP F+DGLRVTDA+TM++V MVLVGRVNK +V+LIN+AG  AVGL G DG L TARP      +GFVGEV+ VD +V+E LVNSG+IPVI+SVAADE GQ++NINADTV               +TD AGIL+N +DP +L+ ++DI+  +++I+ G V GGMIPKV CC+RSLAQGV+ A IIDGR+ H+LLLEI TD G G+MI
Sbjct:   79 KLGIEPQFKDGLRVTDADTMDVVEMVLVGRVNKEIVALINQAGGKAVGLCGKDGNLITARPVGKEG-IGFVGEVSSVDTSVVESLVNSGYIPVISSVAADETGQAHNINADTVAGEIAAALGAAKLILMTDTAGILQNYKDPSTLLAKLDIQQARELIQKGIVAGGMIPKVGCCVRSLAQGVQAAHIIDGRLPHALLLEIFTDRGIGSMI 287          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_NOSP7 (Acetylglutamate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=argB PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.097e-62
Identity = 122/212 (57.55%), Postives = 158/212 (74.53%), Query Frame = -3
Query:  123 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMITG 758
            + GIEP F++GLRVTDA TM++V MVLVGRVNK +V+LIN+AG  AVGL G DG LFTARP      +GFVGEV+ V+  +++ L ++G+IPV++SVAADE GQ+YNINADTV               LTD +GIL++ +D  +L+ ++DI+  +++I +G V GGMIPKVNCC+RSLAQGVR A IIDGR+ H+LLLEI TD G GTMI G
Sbjct:   83 KLGIEPQFKNGLRVTDAATMDVVEMVLVGRVNKEIVALINQAGGLAVGLCGKDGNLFTARPQGQEG-IGFVGEVSNVNIKILDTLASNGYIPVVSSVAADETGQAYNINADTVAGEIAAALGAEKLILLTDTSGILKDYKDQSTLIPKVDIREARELIVNGIVTGGMIPKVNCCVRSLAQGVRAAHIIDGRIPHALLLEIFTDVGIGTMILG 293          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SYNY3 (Acetylglutamate kinase OS=Synechocystis sp. (strain PCC 6803) GN=argB PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.443e-62
Identity = 125/210 (59.52%), Postives = 154/210 (73.33%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIEP F+DGLRVTDA TM+IV MVLVGRVNK LV+LIN+AG  AVGL G DG+L TAR   N   +GFVGEV+ VD  V+E LV SG+IPVI+SVAADEFGQ++NINADT                LTD  GIL + +DP +L+ ++DI+  +++I  G V GGMIPKV CC+RSLAQGVR A I+DGR+ H+LLLE+ TD G G+MI
Sbjct:   82 KVGIEPQFKDGLRVTDAATMDIVEMVLVGRVNKELVNLINQAGGKAVGLCGKDGQLMTARTMTNK-DVGFVGEVSSVDARVVETLVKSGYIPVISSVAADEFGQAHNINADTCAGELAAALGAEKLILLTDTRGILRDYKDPSTLIHKLDIQQARELIGSGIVAGGMIPKVTCCVRSLAQGVRAAHILDGRLPHALLLEVFTDLGIGSMI 290          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SYNP6 (Acetylglutamate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=argB PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.168e-62
Identity = 129/212 (60.85%), Postives = 150/212 (70.75%), Query Frame = -3
Query:  123 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMITG 758
            R GIEP F +GLRVTDA+TME+V MVLVGRVNK +VS IN  G  AVG  G DGRL  ARP      +GFVGEV  V+  VIEPL+  G+IPVI+SVAADE GQS+NINADTV               LTD  GILE+ + P SL+  ++I   +++I  G VGGGMIPKV+CCIRSLAQGVR A IIDGR+ H+LLLEI TDAG GTMI G
Sbjct:   80 RVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEG-IGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVG 290          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SYNE7 (Acetylglutamate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=argB PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.168e-62
Identity = 129/212 (60.85%), Postives = 150/212 (70.75%), Query Frame = -3
Query:  123 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMITG 758
            R GIEP F +GLRVTDA+TME+V MVLVGRVNK +VS IN  G  AVG  G DGRL  ARP      +GFVGEV  V+  VIEPL+  G+IPVI+SVAADE GQS+NINADTV               LTD  GILE+ + P SL+  ++I   +++I  G VGGGMIPKV+CCIRSLAQGVR A IIDGR+ H+LLLEI TDAG GTMI G
Sbjct:   80 RVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEG-IGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVG 290          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_ANASP (Acetylglutamate kinase OS=Anabaena sp. (strain PCC 7120) GN=argB PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.285e-62
Identity = 121/212 (57.08%), Postives = 154/212 (72.64%), Query Frame = -3
Query:  123 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMITG 758
            + GIE  F++GLRVTDA TM++V MVLVGRVNK +VSLIN+AG  AVGL G DG L TARP      +GFVGEV+ V+  ++E L ++G+IPV++SVAAD+ GQ+YNINADTV               LTD  GIL++ +DP +L+ ++DI+  +++I  G V GGMIPKV CC+RSLAQGVR A IIDGR+ H+LLLEI TD G GTMI G
Sbjct:   83 KLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVSLINQAGGLAVGLCGKDGNLITARPQGQEG-IGFVGEVSNVNIKILETLASNGYIPVVSSVAADDSGQAYNINADTVAGEIAAALGAEKLILLTDTRGILKDYQDPGTLIPKVDIREARELINSGVVSGGMIPKVTCCVRSLAQGVRAAHIIDGRIPHALLLEIFTDVGIGTMILG 293          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_ANAVT (Acetylglutamate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=argB PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.584e-61
Identity = 121/212 (57.08%), Postives = 154/212 (72.64%), Query Frame = -3
Query:  123 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMITG 758
            + GIE  F++GLRVTDA TM++V MVLVGRVNK +VSLIN+AG  AVGL G DG L TARP      +GFVGEV+ V+  ++E L ++G+IPV++SVAAD+ GQ+YNINADTV               LTD  GIL++ +DP +L+ ++DI+  +++I  G V GGMIPKV CC+RSLAQGVR A IIDGR+ H+LLLEI TD G GTMI G
Sbjct:   83 KLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVSLINQAGGLAVGLCGKDGNLITARPQGQEG-IGFVGEVSNVNIKILETLASNGYIPVVSSVAADDSGQAYNINADTVAGEIAAALGAEKLILLTDTRGILKDYKDPGTLIPKVDIREARELINGGVVSGGMIPKVTCCVRSLAQGVRAAHIIDGRIPHALLLEIFTDVGIGTMILG 293          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_ACAM1 (Acetylglutamate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=argB PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.701e-61
Identity = 123/212 (58.02%), Postives = 153/212 (72.17%), Query Frame = -3
Query:  126 KRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMIT 761
            ++ GIEP F  GLRVTDA TM++V MVLVGRVNK LVSLIN+AG +AVG+ G DG+L TARP   S  +GFVGEVA V+P +I  L++ GHIP+++SVA DE GQ YNINADTV               LTD  GIL++ +D  SL+ ++DI+  +++I    V GGMIPKV CCIRSLAQG++ A IIDGR  H+LLLEI TD+G GTMIT
Sbjct:   73 EKLGIEPQFMKGLRVTDAPTMDVVEMVLVGRVNKELVSLINQAGGSAVGVCGKDGKLLTARPQGESG-IGFVGEVASVNPQLIHNLLDGGHIPIVSSVATDEEGQVYNINADTVAGELAAALDAEKLILLTDTPGILQDYKDATSLIHKLDIRQARELIAAEVVAGGMIPKVTCCIRSLAQGIQAAHIIDGRAPHALLLEIFTDSGIGTMIT 283          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_TRIEI (Acetylglutamate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=argB PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 7.860e-61
Identity = 122/210 (58.10%), Postives = 153/210 (72.86%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIEP F+DGLRVTDA+TME+V MVLVG+VNK +VSLIN+AG  AVGL G D  L  ARP      +GFVGEV+ V   +++ LV++G+IPV++SVA DE GQ+YN+NADTV               LTD AGILE+  +P SL+ ++DI+  +++IE G V GGMIPKVNCC+RSLAQGVR A I+DGRV H LL EILTD G G+MI
Sbjct:   82 KLGIEPQFKDGLRVTDASTMEVVEMVLVGKVNKEIVSLINQAGGCAVGLCGKDASLIQARPEGIEG-IGFVGEVSNVKIDILQSLVDNGYIPVVSSVATDEQGQAYNLNADTVAGEIAAAMEAEKLILLTDTAGILEDYHNPDSLIVKLDIQEARELIEKGIVSGGMIPKVNCCVRSLAQGVRAAHILDGRVPHVLLQEILTDTGVGSMI 290          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_THEEB (Acetylglutamate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=argB PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.751e-60
Identity = 122/212 (57.55%), Postives = 150/212 (70.75%), Query Frame = -3
Query:  123 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMITG 758
            +  IEP F++GLRVTDA TM++V MVLVGRVNK +V+LIN+AG  AVGL G DG L  AR +     +GFVGEV  VD  VI  LV  G+IPVI+SVAAD+ GQ+YNINADTV               LTD AGIL +  DP +L+  +DI   +++I+DG V GGMIPKV CC+RSLAQGV+ A IIDGRV H+LLLEI TD+G G+M+ G
Sbjct:   74 KLNIEPQFKNGLRVTDAATMDVVEMVLVGRVNKEIVTLINQAGGQAVGLCGKDGNLIRAR-AKGEESIGFVGEVQGVDTRVITALVEKGYIPVISSVAADDTGQAYNINADTVAGEIAAALGAEKLILLTDTAGILRDYRDPSTLIYRLDIAEARQLIKDGVVSGGMIPKVTCCVRSLAQGVKAAHIIDGRVPHALLLEIFTDSGIGSMLVG 284          
The following BLAST results are available for this feature:
BLAST of CN188878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_MICAN1.530e-6460.00Acetylglutamate kinase OS=Microcystis aeruginosa (... [more]
ARGB_NOSP71.097e-6257.55Acetylglutamate kinase OS=Nostoc punctiforme (stra... [more]
ARGB_SYNY32.443e-6259.52Acetylglutamate kinase OS=Synechocystis sp. (strai... [more]
ARGB_SYNP64.168e-6260.85Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_SYNE74.168e-6260.85Acetylglutamate kinase OS=Synechococcus elongatus ... [more]
ARGB_ANASP9.285e-6257.08Acetylglutamate kinase OS=Anabaena sp. (strain PCC... [more]
ARGB_ANAVT1.584e-6157.08Acetylglutamate kinase OS=Anabaena variabilis (str... [more]
ARGB_ACAM12.701e-6158.02Acetylglutamate kinase OS=Acaryochloris marina (st... [more]
ARGB_TRIEI7.860e-6158.10Acetylglutamate kinase OS=Trichodesmium erythraeum... [more]
ARGB_THEEB1.751e-6057.55Acetylglutamate kinase OS=Thermosynechococcus elon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188878 ID=CN188878; Name=CN188878; organism=Citrus sinensis; type=EST; length=763bp
CCTTTTTTTTTTTTTTTACAGTCCATCAATTTTGTTTATTTTTCAATAGC
CCCTTTAAGAAGTAAAAGAAAAAAAATAATTTAGGAATTAAGACGAGGAT
TAGAATTAGGTTTGATTAGCTAGCCAGTGATCATGGTACCGGCACCAGCA
TCAGTCAAAATCTCAAGAAGCAAGGAGTGTTCAACTCTTCCATCAATAAT
ACTAGCAGTCCTGACACCTTGAGCAAGTGATCTAATACAGCAATTCACTT
TGGGTATCATCCCACCACCAACTTTGCCATCTTCAATCATCTTTTTCACT
CCCTTGATATCGATCTCCTTCACCAAGCTCATTGGATCCTCTCTGTTCTC
AAGTATCCCCGCTACATCAGTCAACAATATCAGCTTCTCAGCACCCAATG
CCGCCGCCAGTTCCCCAGCCACAGTGTCCGCATTGATGTTATAAGATTGC
CCAAACTCATCCGCAGCCACAGAAGCAATCACTGGTATGTGTCCACTGTT
TACCAGAGGCTCAATGACCGTGGGGTCCACGCGGGCTACTTCACCAACGA
AACCCAGTTTAGCGGAGTTTGGGCTGGGCCGGGCCGTGAAGAGGCGCCCG
TCCATGCCCGAGAGCCCAACCGCGGTGGCGCCGGCTTTGTTGATGAGAGA
AACCAAGCTCTTGTTCACCCTCCCCACCAGAACCATGGACACGATCTCCA
TAGTGTTGGCATCAGTGACGCGGAGGCCGTCACGGAAAACGGGCTCGATT
CCGAAACGTTTGA
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