CN182072

Overview
NameCN182072
Unique NameCN182072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13509 contig Csv1_Contig13509:10..539. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIC2_ARATH (Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana GN=At5g47720 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.405e-41
Identity = 87/121 (71.90%), Postives = 97/121 (80.17%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXXASALVVELV 368
            IAKI GYADAAQAPE+FTT PALAIPKAI  AGL+ASQVD YEINEAF+VVALANQKLLGL+P+++N HGGAV+LGHPLGCSGARILVTLLGVLR                 ASALV+E +
Sbjct:  285 IAKIRGYADAAQAPELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIC1_ARATH (Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.294e-40
Identity = 85/121 (70.25%), Postives = 99/121 (81.82%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXXASALVVELV 368
            +AKI GY DAAQ PE FTTAPALAIPKAI++AGLE+SQVD YEINEAFAVVALANQKLLG+ P+KVNV+GGAV+LGHPLGCSGARIL+TLLG+L++                ASALV+EL+
Sbjct:  283 LAKIKGYGDAAQEPEFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_SCHPO (Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe GN=erg10 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.773e-32
Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXXASALVVELV 368
            +AKI G+ +AAQ PE FTT+P+LAIPKA+ +AG+EASQVD YEINEAF+VVA+AN K+LGL+P++VN++GG VA+GHPLG SG+RI+ TL  +L Q                AS++V+E V
Sbjct:  275 LAKIIGWGEAAQDPERFTTSPSLAIPKALKHAGIEASQVDYYEINEAFSVVAVANTKILGLDPERVNINGGGVAMGHPLGSSGSRIICTLAYILAQKDAKIGVAAVCNGGGGASSIVIERV 395          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL1_DICDI (Probable acetyl-CoA acetyltransferase OS=Dictyostelium discoideum GN=DDB_G0271544 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.289e-29
Identity = 67/119 (56.30%), Postives = 85/119 (71.43%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXXASALVVE 362
            +A+I GYADA QAP  F TAPALAIPKA+ NAG+  SQVD +EINEAFAVV LAN K+L ++ +K+NV+GGAVALGHP+G SG RI+VTL  +L+                 ++ALV+E
Sbjct:  294 LARIIGYADAEQAPIEFPTAPALAIPKALKNAGINMSQVDLFEINEAFAVVGLANAKILDIDHNKLNVNGGAVALGHPIGSSGCRIVVTLTHLLQNKNLKYGVAAICNGGGGSTALVLE 412          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIA_CANTR (Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 2.989e-29
Identity = 64/121 (52.89%), Postives = 87/121 (71.90%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXXASALVVELV 368
            +AKI+G+ +AA+ P  FT APALA+PKA+ +AGL   +VD +E+NEAF+VV LAN +L+ +  +K+NV+GGAVA+GHPLGCSGARI+VTLL VL Q                ASA+V+E +
Sbjct:  277 LAKISGWGEAARTPFDFTIAPALAVPKAVKHAGLTVDRVDFFELNEAFSVVGLANAELVNIPLEKLNVYGGAVAMGHPLGCSGARIIVTLLSVLTQEGGRFGVAGVCNGGGGASAVVIEKI 397          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIB_CANTR (Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 3.904e-29
Identity = 64/121 (52.89%), Postives = 87/121 (71.90%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXXASALVVELV 368
            +AKI+G+ +AA+ P  FT APALA+PKA+ +AGL   +VD +E+NEAF+VV LAN +L+ +  +K+NV+GGAVA+GHPLGCSGARI+VTLL VL Q                ASA+V+E +
Sbjct:  277 LAKISGWGEAARTPFDFTIAPALAVPKAVKHAGLTVDRVDFFELNEAFSVVGLANAELVKIPLEKLNVYGGAVAMGHPLGCSGARIIVTLLSVLTQEGGRFGAAGVCNGGGGASAIVIEKI 397          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 7.363e-28
Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLE-ASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXXASALVVELV 368
            +A I G+ +AA  P  FT AP+LA+PKA+ +AG+E  + VD +E NEAF+VV L N K+L L+P KVNV+GGAVALGHPLGCSGAR++VTLL +L+Q                AS++V+E +
Sbjct:  277 LAIIKGWGEAAHQPADFTWAPSLAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCSGARVVVTLLSILQQEGGKIGVAAICNGGGGASSIVIEKI 398          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_SACBA (Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.640e-27
Identity = 62/120 (51.67%), Postives = 84/120 (70.00%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLE-ASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXXASALVVE 362
            +A + G+ +AA  P  FT AP+LA+PKA+ +AG+E  + VD +E NEAF+VV L N K+L L+P KVNV+GGAVALGHPLGCSGAR++VTLL +L+Q                AS++V+E
Sbjct:  277 LAIVKGWGEAAHLPADFTWAPSLAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCSGARVVVTLLSILQQEGGKIGVAAICNGGGGASSVVIE 396          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_YARLI (Acetyl-CoA acetyltransferase OS=Yarrowia lipolytica GN=PAT1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.939e-24
Identity = 57/96 (59.38%), Postives = 69/96 (71.88%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +AKI  YADAA AP  FT AP+LAIP A+  AGL    +  +EINEAF+ VALAN   LG++  KVNV GGAVALGHP+G SG RI VTL+  L++
Sbjct:  275 LAKIVSYADAATAPIDFTIAPSLAIPAALKKAGLTKDDIALWEINEAFSGVALANLMRLGIDKSKVNVKGGAVALGHPIGASGNRIFVTLVNALKE 370          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_RAT (Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.451e-23
Identity = 53/96 (55.21%), Postives = 70/96 (72.92%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +A+I  +ADAA  P  F  APA A+PK +  AGL+   +  +E+NEAF+VV LAN K+L ++P KVNVHGGAV+LGHP+G SGARI+V L   L+Q
Sbjct:  306 LARIAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNVHGGAVSLGHPIGMSGARIVVHLAHALKQ 401          
The following BLAST results are available for this feature:
BLAST of CN182072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
THIC2_ARATH3.405e-4171.90Probable acetyl-CoA acetyltransferase, cytosolic 2... [more]
THIC1_ARATH1.294e-4070.25Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabi... [more]
THIL_SCHPO3.773e-3256.20Acetyl-CoA acetyltransferase OS=Schizosaccharomyce... [more]
THIL1_DICDI2.289e-2956.30Probable acetyl-CoA acetyltransferase OS=Dictyoste... [more]
THIA_CANTR2.989e-2952.89Acetyl-CoA acetyltransferase IA OS=Candida tropica... [more]
THIB_CANTR3.904e-2952.89Acetyl-CoA acetyltransferase IB OS=Candida tropica... [more]
THIL_YEAST7.363e-2851.64Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]
THIL_SACBA1.640e-2751.67Acetyl-CoA acetyltransferase OS=Saccharomyces baya... [more]
THIL_YARLI4.939e-2459.38Acetyl-CoA acetyltransferase OS=Yarrowia lipolytic... [more]
THIL_RAT2.451e-2355.21Acetyl-CoA acetyltransferase, mitochondrial OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182072 ID=CN182072; Name=CN182072; organism=Citrus sinensis; type=EST; length=530bp
GAGGGATCGCCAAGATCACAGGATATGCTGATGCTGCTCAGGCACCAGAG
ATGTTTACGACAGCTCCAGCCCTAGCCATACCTAAAGCCATTTCAAATGC
TGGCTTGGAGGCTTCTCAAGTTGACTGTTACGAAATAAATGAGGCCTTTG
CTGTCGTCGCCCTTGCAAACCAGAAATTGCTTGGACTAAATCCTGACAAG
GTTAATGTCCATGGTGGAGCAGTAGCTTTGGGACATCCTCTGGGCTGCAG
CGGAGCTCGTATCTTGGTCACACTTTTGGGGGTACTTAGGCAGAAAAACG
GGAAATACGGTGTTGGTGGCGTTTGCAACGGAGGAGGAGGTGCATCGGCA
CTTGTTGTAGAGCTTGTGTAAGCCTTTTCTGTTCGGATTATTATCAACGA
GGTTGCACCCTTCTTGTGGAGTATAATTATGGCCCATTAGGGTGGGGTGT
TGTGCAATTGTATCTCCGTTTCTTTTTCATATGTGCTTTCGTCTTCAATA
AAAAGATAATAATTTTCTGGCTTAAAAAAA
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