CN182061

Overview
NameCN182061
Unique NameCN182061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:450..967. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 2.496e-94
Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSAT AVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF
Sbjct:  313 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 484          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 3.259e-94
Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGR DPNQNTGIVIQKSRIGATSDLKPVQGSF
Sbjct:  313 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSF 484          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 2.118e-85
Identity = 156/172 (90.70%), Postives = 162/172 (94.19%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            ENVEV KK KNIMF+GDGRTRTIITGSRNVVDGSTTF SATVA VGE FLARDITFQNTAGPSKHQAVALRVG+D SAFYNCDMLAYQDTLYVHSNRQFFV CLIAGTVDFIFGNAA VLQ+CDIHAR+PNSGQKNMVTAQGRTDPNQNTGIVIQK RIGATSDL+ V+GSF
Sbjct:  321 ENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSF 492          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 3.164e-81
Identity = 147/172 (85.47%), Postives = 158/172 (91.86%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            ENV+V KK KNIMF+GDGRT TIIT S+NV DGSTTF SATVA VG GFLARDITFQNTAG +KHQAVALRVG+DLSAFY CD+LAYQD+LYVHSNRQFF+NC IAGTVDFIFGNAA VLQ+CDIHAR+P SGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDL+PVQ SF
Sbjct:   48 ENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSF 219          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 293.893 bits (751), Expect = 2.962e-79
Identity = 146/172 (84.88%), Postives = 155/172 (90.12%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            ENVEVTKK  NIMF+GDGR +TIITGSRNVVDGSTTF SATVA VGE FLARDITFQNTAGPSKHQAVALRVG+D SAFY CDM AYQDTLYVHSNRQFFV C I GTVDFIFGNAAAVLQ+CDI+AR+PNSGQKNMVTAQGR+DPNQNTGIVIQ  RIG TSDL  V+G+F
Sbjct:  316 ENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTF 487          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.521e-75
Identity = 141/172 (81.98%), Postives = 150/172 (87.21%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            ENV+V KK  NIMF+GDG++ TIIT SRNV DGSTTF SATV  V    LARDITFQNTAG SKHQAVAL VG+DLSAFY CDMLAYQDTLYVHSNRQFFV CL+AGTVDFIFGN AAV Q+CDIHAR+P SGQKNMVTAQGRTDPNQNTGIVIQK RIGATSDL+PVQ SF
Sbjct:  312 ENVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSF 483          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.382e-60
Identity = 114/172 (66.28%), Postives = 135/172 (78.49%), Query Frame = -2
Query:    2 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSF 517
            E V+V KK  N+MFIGDG  +T I G+R+VVDG TTF+S+TVAVVG GF+AR I+F+N AGPSKHQAVALR GAD SAFY C  + YQDTLYVHS RQF+  C + GT+DFIFGNAAAVLQ C+++ARKPN  QKN+ TAQGR DPNQNTGI I   ++ A +DL PV  SF
Sbjct:   49 EYVDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSF 220          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 3.079e-60
Identity = 118/171 (69.01%), Postives = 136/171 (79.53%), Query Frame = -2
Query:    5 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGS 517
            EN+EV  K KNIMF+GDG  +TIITGS++V  G+TTFKSATVAVVG+ F+ARDIT +NTAGP+ HQAVALR G+DLS FY C    YQDTLYVHS RQF+  C I GTVDFIFGNAA VLQNC+I ARKP   + N +TAQGRTDPNQ+TGI+I   R+ A SDLKPVQ S
Sbjct:  242 ENIEV--KLKNIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSS 409          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 1.170e-59
Identity = 112/171 (65.50%), Postives = 135/171 (78.95%), Query Frame = -2
Query:    5 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGS 517
            E +++ KK KN+M +GDG+  TIITGS NV+DGSTTF+SATVA  G+GF+A+DI FQNTAGP+KHQAVALRV AD +    C + AYQDTLY H+ RQF+ +  I GTVDFIFGN+A V QNCDI AR P +GQKNM+TAQGR D NQNT I IQK +I A+SDL PV+GS
Sbjct:  286 ETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGS 456          
BLAST of CN182061 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 5.807e-59
Identity = 115/171 (67.25%), Postives = 137/171 (80.12%), Query Frame = -2
Query:    5 ENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGS 517
            EN+E+ KK  N+M  GDG  +TIITGS++V  G+TTF SATVA VG+GF+AR ITF+NTAG S  QAVALR G+DLS FY C   AYQDTLYVHSNRQF+ +C + GTVDFIFGNAAAVLQNC+I AR+P S + N +TAQGR+DPNQNTGI+I  SR+ A SDL+PV GS
Sbjct:  244 ENLEIRKK--NVMLRGDGIGKTIITGSKSVGGGTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRS-KTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGS 411          
The following BLAST results are available for this feature:
BLAST of CN182061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
PME1_CITSI2.496e-9499.42Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME3_CITSI3.259e-9499.42Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME3_ARATH2.118e-8590.70Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME_DAUCA3.164e-8185.47Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME2_ARATH2.962e-7984.88Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PMEU1_SOLLC1.521e-7581.98Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME_ACTDE1.382e-6066.28Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME2_CITSI3.079e-6069.01Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME18_ARATH1.170e-5965.50Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME17_ARATH5.807e-5967.25Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182061 ID=CN182061; Name=CN182061; organism=Citrus sinensis; type=EST; length=518bp
GGAAACTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAATCCTAGAT
TTTTGAATGACAATGCCGGTGTTTTGGTTAGGGTCAGTCCTGCCTTGGGC
TGTGACCATATTTTTTTGGCCGGAATTGGGCTTTCGTGCATGGATGTCAC
AATTTTGTAACACGGCTGCAGCATTACCAAAAATGAAATCAACCGTGCCA
GCAATTAAGCAGTTCACAAAGAACTGGCGGTTCGAGTGGACGTAGAGTGT
GTCTTGGTAAGCTAACATATCGCAATTGTAAAATGCTGAAAGGTCAGCTC
CCACTCGCAGTGCCACTGCCTGGTGCTTTGAGGGGCCTGCTGTGTTTTGG
AATGTAATGTCTCGGGCCAAGAATCCTTCACCAACAACAGCAACTGTAGC
AGACTTGAAAGTTGTGCTTCCATCAACCACATTTCTACTTCCTGTGATGA
TAGTTCTAGTCCTTCCGTCACCGATGAACATTATATTTTTATGCTTCTTT
GTCACCTCAACATTTTCC
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