CN182056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182056 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.933e-36 Identity = 65/94 (69.15%), Postives = 72/94 (76.60%), Query Frame = 3 Query: 117 QNQAAGTGIAAS-QLQAQGNRPARGTTQGSLNHQECAPKCHYRCSATSYKKPCLFFCQKCCAKCLCVPAGTYGNKQTCPCYNNWNTKRGGPKCP 395 QNQ + I Q Q Q N G ++G L+ Q+C PKC YRCS TSYKKPC+FFCQKCCAKCLCVPAGTYGNKQ+CPCYNNW TKRGGPKCP Sbjct: 19 QNQVSRANIMRDEQQQQQRNNQLYGVSEGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of CN182056 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.363e-28 Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 3 Query: 204 LNHQECAPKCHYRCSATSYKKPCLFFCQKCCAKCLCVPAGTYGNKQTCPCYNNWNTKRGGPKCP 395 L +C P+C YRCSATS+KKPC+FFCQKCCA CLCVP G YGNKQ+CPCYNNW T+ G PKCP Sbjct: 33 LRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of CN182056 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 5.461e-23 Identity = 41/66 (62.12%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 198 GSLNHQECAPKCHYRCSATSYKKPCLFFCQKCCAKCLCVPAGTYGNKQTCPCYNNWNTKRGGPKCP 395 GSL +C +C RC T Y K C+ FC KCC KCLCVP G YGNKQ C CYNNW T+ GGPKCP Sbjct: 41 GSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
BLAST of CN182056 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13 Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 219 CAPKCHYRCSATSYKKPCLFFCQKCCAKCLCVPAGTYGNKQTCPCYNNWNTKRGGPKCP 395 C KC RCS CL +C CC +C CVP+GTYGNK CPCY + +G KCP Sbjct: 30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
BLAST of CN182056 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12 Identity = 29/60 (48.33%), Postives = 35/60 (58.33%), Query Frame = 3 Query: 216 ECAPKCHYRCSATSYKKPCLFFCQKCCAKCLCVPAGTYGNKQTCPCYNNWNTKRGGPKCP 395 +C +C RCS +S K CL C CC++C CVP GT GN CPCY + T G KCP Sbjct: 40 DCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of CN182056 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.152e-11 Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 3 Query: 216 ECAPKCHYRCSATSYKKPCLFFCQKCCAKCLCVPAGTYGNKQTCPCYNNWNTKRGGPKCP 395 +C +C RCS +S CL C CC +C CVP GT GN CPCY + T+ G KCP Sbjct: 40 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99 The following BLAST results are available for this feature:
BLAST of CN182056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182056 ID=CN182056; Name=CN182056; organism=Citrus sinensis; type=EST; length=530bpback to top |