CN182050

Overview
NameCN182050
Unique NameCN182050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1447 contig Csv1_Contig1447:970..1484. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182050 vs. ExPASy Swiss-Prot
Match: ADK2_ARATH (Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.316e-14
Identity = 31/40 (77.50%), Postives = 38/40 (95.00%), Query Frame = -1
Query:  318 FLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 437
            F+SQLV+EK +E+CV+AGCYA+NVVIQRSGCTYP KP+FN
Sbjct:  306 FMSQLVKEKSIEECVKAGCYASNVVIQRSGCTYPEKPDFN 345          

HSP 2 Score: 23.483 bits (49), Expect = 5.316e-14
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = -3
Query:  475 FPVILLPKEKLV 510
            +PVI LPKEKLV
Sbjct:  282 YPVIPLPKEKLV 293          
BLAST of CN182050 vs. ExPASy Swiss-Prot
Match: ADK1_ARATH (Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-13
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = -1
Query:  318 FLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 437
            FLSQLV  K +E+CVRAGCYA+NVVIQRSGCTYP KP+FN
Sbjct:  305 FLSQLVHGKGIEECVRAGCYASNVVIQRSGCTYPEKPDFN 344          

HSP 2 Score: 23.483 bits (49), Expect = 1.514e-13
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = -3
Query:  475 FPVILLPKEKLV 510
            +PVI LPKEKLV
Sbjct:  281 YPVIPLPKEKLV 292          
The following BLAST results are available for this feature:
BLAST of CN182050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ADK2_ARATH5.316e-1477.50Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2... [more]
ADK1_ARATH1.514e-1380.00Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182050 ID=CN182050; Name=CN182050; organism=Citrus sinensis; type=EST; length=515bp
TTTTTTTTTTATTTAAATGGAAAATCCATTCCCTCTGTAAGTAAATGTCA
CGTATTCTTATCCACATGGGGGACAGAGTACACAAACAAATTCAACATTT
AAGGTATTTAAATGGAAAATCCATTCCCTCTGTAAGTAAATGTCATGTAT
TCTTATCCACATGGGGGACAGAGTATCACAAACAAATTCAACATTGAAAT
AACTCCTTGATTAAATAATACAGGCCCCTTAATCAAGTTTGAAAAATGAA
AAAACAGCGGAAGAAAACTGACAATAGCAAAGGCCGCAAGAAATTCTTGC
AATGAGGAATCACCCTAATTGAATTCAGGTTTTGGGGGGTAAGTGCAGCC
TGACCTTTGGATTACAACATTTGCCGCATAGCAACCAGCTCTCACACAAT
CTTCCACTGGCTTCTCTTGAACCAACTGTGACAAAAAATCCTCCGACAAA
TGCATCCCCTGCTCCATTAAAATCAACCAATTTTTCCTTGGGTAGCAAGA
TCACAGGGAATAATT
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