CN182047

Overview
NameCN182047
Unique NameCN182047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12440 contig Csv1_Contig12440:187..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBE12_WHEAT (Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.413e-106
Identity = 185/235 (78.72%), Postives = 212/235 (90.21%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNP-KMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDR 704
            PED+ TS+GAPFWSAPKRFP P++FSS+DPS L F++AA+ILRAETFGIPI +W K P K+ AEAVDKV+VPDF PK+  KI+TDEKAT+LS+ASVDDAAVI +LI KLE+  K LPSGF + PIQFEKDDDTN+HMD+IAG ANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCL+LYK L GGHK+EDYRNTFANLA+PLFS+AEPVPPK IKH+++SWTVWDR
Sbjct:  725 PEDSMTSSGAPFWSAPKRFPRPVEFSSSDPSQLSFILAAAILRAETFGIPISEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTDEKATSLSSASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDR 959          
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBE11_WHEAT (Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 9.158e-106
Identity = 184/235 (78.30%), Postives = 211/235 (89.79%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNP-KMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDR 704
            PED+ TS+GAPFWSAPKRFP P++FSS+D S L F++AA+ILRAETFGIPIP+W K P K+ AEAVDKV+VPDF PK+  KI+T EKAT+LS+ASVDDAAVI +LI KLE+  K LPSGF + PIQFEKDDDTN+HMD+IAG ANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCL+LYK L GGHK+EDYRNTFANLA+PLFS+AEPVPPK IKH+++SWTVWDR
Sbjct:  725 PEDSMTSSGAPFWSAPKRFPRPVEFSSSDQSQLSFILAAAILRAETFGIPIPEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTHEKATSLSSASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDR 959          
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBE13_WHEAT (Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 1.976e-100
Identity = 175/234 (74.79%), Postives = 204/234 (87.18%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDR 704
            PEDAATS GAPFWSAPKRFP  LQFS+AD SHL+F+M+ASILRAE+FG+ IP+W K+   LA+ V+K+ VP F PK+   I+TDEKA+ LS+ SVDD AVI DL+ KL++  K L  GF++KPIQFEKDDDTN+HMD+I+GLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCL+LYKV+ G H +EDYRNTFANLALPLFSMAEPVPPKV+KH++ SWTVWDR
Sbjct:  728 PEDAATSMGAPFWSAPKRFPRALQFSAADQSHLNFIMSASILRAESFGVAIPEWAKDTSKLADVVNKIAVPTFEPKQGVNIVTDEKASNLSSTSVDDVAVIEDLLAKLQEYAKMLLPGFQMKPIQFEKDDDTNFHMDLISGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHPVEDYRNTFANLALPLFSMAEPVPPKVMKHKETSWTVWDR 961          
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBA1_RABIT (Ubiquitin-like modifier-activating enzyme 1 OS=Oryctolagus cuniculus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.609e-57
Identity = 112/239 (46.86%), Postives = 153/239 (64.02%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDR 704
            P D  TS+GAPFWS PKR PHPL F  ++P HL +VMAA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDDD+N+HMD I   +N+RA NY IP  D+ K+K IAG+IIPAIAT+TA   GLVCL+LYKV+ G   L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR
Sbjct:  730 PPDQLTSSGAPFWSGPKRCPHPLTFDVSNPLHLDYVMAAANLFAQTYGLA---GSQDRAAVATLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRHLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDR 957          
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBA1_BOVIN (Ubiquitin-like modifier-activating enzyme 1 OS=Bos taurus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.609e-57
Identity = 112/239 (46.86%), Postives = 153/239 (64.02%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDR 704
            P D  TS+GAPFWS PKR PHPL F  ++P HL +V+AA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDDDTN+HMD I   +N+RA NY IP  D+ K+K IAG+IIPAIAT+TA   GLVCL+LYKV+ G  +L  Y+N F NLALP F  +EP+     ++ +  WT+WDR
Sbjct:  730 PPDQLTSSGAPFWSGPKRCPHPLTFDVSNPLHLDYVIAAANLFAQTYGLT---GSQDRAAVATLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPEKLPGFKMYPIDFEKDDDTNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLNSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDR 957          
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBA1_HUMAN (Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 6.019e-57
Identity = 112/239 (46.86%), Postives = 153/239 (64.02%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDR 704
            P D  TS+GAPFWS PKR PHPL F   +P HL +VMAA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDDD+N+HMD I   +N+RA NY IP  D+ K+K IAG+IIPAIAT+TA   GLVCL+LYKV+ G  +L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR
Sbjct:  730 PPDQLTSSGAPFWSGPKRCPHPLTFDVNNPLHLDYVMAAANLFAQTYGLT---GSQDRAAVATFLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDIPSADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDR 957          
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBA1_RAT (Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.303e-55
Identity = 110/239 (46.03%), Postives = 151/239 (63.18%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDR 704
            P D  TS+GAPFWS PKR PHPL F   +  HL +VMAA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDDD+N+HMD I   +N+RA NY I   D+ K+K IAG+IIPAIAT+TA   GLVCL+LYKV+ G  +L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR
Sbjct:  730 PPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLT---GSQDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHQQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDR 957          
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBA1_MOUSE (Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.303e-55
Identity = 110/239 (46.03%), Postives = 151/239 (63.18%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDR 704
            P D  TS+GAPFWS PKR PHPL F   +  HL +VMAA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDDD+N+HMD I   +N+RA NY I   D+ K+K IAG+IIPAIAT+TA   GLVCL+LYKV+ G  +L+ Y+N F NLALP F  +EP+     ++ +  WT+WDR
Sbjct:  730 PPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLT---GSQDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHQQLDSYKNGFLNLALPFFGFSEPLAAPRHQYYNQEWTLWDR 957          
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBA1Y_MOUSE (Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus GN=Ube1ay PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.388e-53
Identity = 107/240 (44.58%), Postives = 157/240 (65.42%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKI-LTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDR 704
            P    TS+GA FWS PKR PHPL F   +P HL +VMAA+ L A+T+G+     +++  ++A+ +  + VP F PK   +I +++++  + S  ++DD+         LE+ +  LP+     GF++ PI FEKDDD+N+HMD I   +N+RA NY I   D+ K+K IAG+IIPAIAT+T+   GLVCL+LYKV+ G  +LE Y+N+F NLALPLFS + P+ P+  ++ D  WT+WDR
Sbjct:  729 PPAQLTSSGALFWSGPKRCPHPLTFDINNPLHLDYVMAAANLFAQTYGL---GGSQDCAVVAKLLQSLPVPKFAPKSGIRIHVSEQELQSTSATTIDDS--------HLEELKTALPTPDKLLGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYGISPADRHKSKLIAGKIIPAIATTTSAIVGLVCLELYKVVQGHQQLESYKNSFINLALPLFSFSAPLAPECHQYYDQEWTLWDR 957          
BLAST of CN182047 vs. ExPASy Swiss-Prot
Match: UBA1_YEAST (Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 5.107e-48
Identity = 99/237 (41.77%), Postives = 143/237 (60.34%), Query Frame = 3
Query:    3 PEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKM--LAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLDLYKVLDGGHKLEDYRNTFANLALPLFSMAEPV-PPKVIKHRDMSWTVWDR 704
            P+DA TS G PFWS  KR P PL+F   +  H HFV+A + LRA  +GI   D    P +      +D +++P+F P  + KI  ++     +  + + +  I+ L+  L     +  +GF+L+P+ FEKDDDTN+H++ I   +N RA+NY I   D+ K KFIAGRIIPAIAT+T++ TGLV L+LYK++D    +E Y+N F NLALP F  +EP+  PK   +      +WDR
Sbjct:  696 PKDAKTSNGEPFWSGAKRAPTPLEFDIYNNDHFHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQLVSSLPD--PSTLAGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFSEPIASPKGEYNNKKYDKIWDR 930          
The following BLAST results are available for this feature:
BLAST of CN182047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
UBE12_WHEAT1.413e-10678.72Ubiquitin-activating enzyme E1 2 OS=Triticum aesti... [more]
UBE11_WHEAT9.158e-10678.30Ubiquitin-activating enzyme E1 1 OS=Triticum aesti... [more]
UBE13_WHEAT1.976e-10074.79Ubiquitin-activating enzyme E1 3 OS=Triticum aesti... [more]
UBA1_RABIT4.609e-5746.86Ubiquitin-like modifier-activating enzyme 1 OS=Ory... [more]
UBA1_BOVIN4.609e-5746.86Ubiquitin-like modifier-activating enzyme 1 OS=Bos... [more]
UBA1_HUMAN6.019e-5746.86Ubiquitin-like modifier-activating enzyme 1 OS=Hom... [more]
UBA1_RAT3.303e-5546.03Ubiquitin-like modifier-activating enzyme 1 OS=Rat... [more]
UBA1_MOUSE3.303e-5546.03Ubiquitin-like modifier-activating enzyme 1 OS=Mus... [more]
UBA1Y_MOUSE1.388e-5344.58Ubiquitin-like modifier-activating enzyme 1 Y OS=M... [more]
UBA1_YEAST5.107e-4841.77Ubiquitin-activating enzyme E1 1 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N24_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182047 ID=CN182047; Name=CN182047; organism=Citrus sinensis; type=EST; length=705bp
TTCCTGAAGATGCTGCTACCAGTACTGGGGCTCCATTCTGGTCTGCCCCA
AAGCGATTCCCTCATCCTCTTCAGTTCTCATCTGCGGATCCCAGTCACCT
ACACTTTGTTATGGCAGCATCCATACTACGAGCAGAGACATTTGGCATCC
CTATTCCTGATTGGACCAAGAATCCTAAGATGTTGGCTGAGGCTGTTGAC
AAAGTGATGGTACCAGATTTTCTGCCAAAGAAAGATGCAAAAATCTTAAC
GGATGAGAAGGCTACTACTCTCTCCACTGCTTCTGTGGATGATGCAGCGG
TAATTAATGATCTGATTATAAAGTTAGAGCAGTGCAGAAAGAACCTGCCA
TCTGGGTTCAGGTTGAAACCAATTCAGTTCGAAAAGGATGATGACACAAA
TTACCACATGGATATGATAGCTGGGCTTGCTAACATGAGGGCAAGGAACT
ATAGCATTCCTGAGGTCGACAAGCTGAAAGCCAAGTTTATTGCTGGAAGG
ATCATTCCAGCAATTGCAACCTCCACTGCAATGGCTACCGGTCTTGTGTG
CCTGGATCTATACAAGGTTCTGGATGGAGGACACAAACTGGAAGACTACC
GAAATACATTTGCCAACCTAGCTTTGCCTCTGTTCTCTATGGCTGAGCCA
GTCCCACCAAAGGTCATAAAGCACCGTGATATGAGCTGGACTGTTTGGGA
CAGAT
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