CN182030

Overview
NameCN182030
Unique NameCN182030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2300 contig Csv1_Contig2300:4..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.308e-63
Identity = 83/125 (66.40%), Postives = 97/125 (77.60%), Query Frame = 2
Query:  212 RFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586
            RFRHT+RT+Q SLI+SSF+NI++GY  A GNL R FSPI++VP V VV LGLF+RGFPLL NCVEIGLPML+LL I QQYLK        ILER+ALL C+ + W FAAILT +GAYNNV   TK
Sbjct:  147 RFRHTMRTVQGSLIISSFVNIIIGYGQAWGNLIRIFSPIIVVPVVSVVSLGLFLRGFPLLANCVEIGLPMLILLIITQQYLKHAFSRISMILERYALLVCLAIIWAFAAILTVSGAYNNVSTATK 271          

HSP 2 Score: 91.6633 bits (226), Expect = 4.308e-63
Identity = 46/67 (68.66%), Postives = 52/67 (77.61%), Query Frame = 1
Query:    4 TLVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSIINDYNDGSFTSD 204
            TLV  MGG  GD  RVIQ++LFMSG+NTLLQTL GTRLP V G S A+ LPVLSII DYN+G F S+
Sbjct:   78 TLVSPMGGDPGDKARVIQTILFMSGINTLLQTLIGTRLPTVMGVSFAYVLPVLSIIRDYNNGQFDSE 144          
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.095e-48
Identity = 70/128 (54.69%), Postives = 89/128 (69.53%), Query Frame = 2
Query:  206 HDRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHF-ILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586
            H+RF HT+R IQ +LIV+S I I+LGYS   G  SRFFSP+ + P V +VGLG+F RGFP LGNC+EIGLPML+L+    QYLK + P     I ERF +L C+ + W +A ILTA+GAY   P  T+
Sbjct:  116 HERFIHTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGMAPVVGLVGLGMFQRGFPQLGNCIEIGLPMLLLVIGLTQYLKHVRPFKDVPIFERFPILICVTIVWIYAVILTASGAYRGKPSLTQ 243          

HSP 2 Score: 75.485 bits (184), Expect = 3.095e-48
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1
Query:    7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSIINDYNDGSFTSD 204
            LVP MGG  GD  RVIQ+LLF++G+ TLLQ LFGTRLP V G S A+ +P+  IIND +    ++D
Sbjct:   50 LVPAMGGSDGDRARVIQTLLFVAGIKTLLQALFGTRLPAVVGGSLAYVVPIAYIINDSSLQKISND 115          
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.645e-46
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 2
Query:  212 RFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586
            RF  T+R +Q ++IV+S + I+LG+S      SRFFSPI +VP + + G GLF RGFP++GNCVEIGLPML+L  I  QYLK        ++ERFAL+  + + W +A +LTA+GAY + P QT+
Sbjct:  123 RFLSTMRAVQGAIIVASSVQIILGFSQMWAICSRFFSPIGMVPVIALTGFGLFNRGFPVVGNCVEIGLPMLILFVIFSQYLKNFQFRQFPVVERFALIIALIIVWAYAHVLTASGAYKHRPHQTQ 247          

HSP 2 Score: 79.7221 bits (195), Expect = 1.645e-46
Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = 1
Query:    7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSIIND 177
            LVP+MGG  GD  RV+Q+LLF+ G+NTLLQTLFGTRLP V G S AF +P++SII+D
Sbjct:   55 LVPMMGGDDGDKVRVVQTLLFLQGVNTLLQTLFGTRLPTVIGGSYAFMVPIISIIHD 111          
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.365e-39
Identity = 58/127 (45.67%), Postives = 79/127 (62.20%), Query Frame = 2
Query:  206 HDRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586
            H RF  T+R IQ +LI++S  ++++G+ G    L RF SP+   P V + G+GL    FP L  C+EIGLP L++L I  QYL  L      I E+FA+LF I + W +A ILTAAGAY+  PD T+
Sbjct:  121 HLRFEETMRAIQGALIIASISHMIMGFFGLWRILVRFLSPLSAAPLVILTGVGLLAFAFPQLARCIEIGLPALIILIILSQYLPHLFKCKRSICEQFAVLFTIAIVWAYAEILTAAGAYDKRPDNTQ 247          

HSP 2 Score: 67.3958 bits (163), Expect = 6.365e-39
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1
Query:    7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSIINDY 180
            LVPLMGGG  +   VI ++LF+SG+NTLLQ+LFG+RLP V G S A+ +P L I   Y
Sbjct:   55 LVPLMGGGDVEKAEVINTVLFVSGINTLLQSLFGSRLPVVMGASYAYLIPALYITFSY 112          
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.521e-37
Identity = 53/126 (42.06%), Postives = 78/126 (61.90%), Query Frame = 2
Query:  209 DRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586
            DRF   +R  Q +LIV+S + ++LG+SG   N+ RF SPI  VP V +VG GL+  GFP +  C+EIGLP L++L    QYL  +  +   + +RFA++F + + W +A +LT  GAYN     T+
Sbjct:  128 DRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFGLYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLLTVGGAYNGAAPTTQ 253          

HSP 2 Score: 68.5514 bits (166), Expect = 1.521e-37
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 1
Query:    7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSII 171
            LVP MGGG+ +  +VIQ++LF++G+NTLLQTLFGTRLP V G S  F    +SII
Sbjct:   61 LVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPAVVGASYTFVPTTISII 115          
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 9.682e-37
Identity = 52/126 (41.27%), Postives = 78/126 (61.90%), Query Frame = 2
Query:  209 DRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586
            ++F+  +R IQ +LIV+S + IV+G+SG   N+ R  SP+  VP V + G GL+  GFPLL  C+EIGLP ++LL +  QY+  L      +  RFA++F + + W +A +LT  GAY N    T+
Sbjct:  134 EKFKRIMRGIQGALIVASILQIVVGFSGLWRNVVRLLSPLSAVPLVALAGFGLYEHGFPLLAKCIEIGLPEIILLLLFSQYIPHLIRGERQVFHRFAVIFSVVIVWIYAHLLTVGGAYKNTGVNTQ 259          

HSP 2 Score: 65.0846 bits (157), Expect = 9.682e-37
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1
Query:    7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSII 171
            LVP MGGG+ +  +++Q+LLF+SGLNTLLQ+ FGTRLP V G S  +    LSII
Sbjct:   67 LVPQMGGGNEEKAKMVQTLLFVSGLNTLLQSFFGTRLPAVIGGSYTYVPTTLSII 121          
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.311e-35
Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 2
Query:  209 DRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586
            +RF+  IR  Q +LIV+S + I+LG+SG   N+ RF SP+   P V +VG GL+  GFP +  C+EIGLP L++L +  QY+  +      +  RFA++F + + W +A  LT  GAYN V   T+
Sbjct:  124 ERFKRIIRATQGALIVASTLQIILGFSGLWRNVVRFLSPLSAAPLVGLVGYGLYELGFPGVAKCIEIGLPGLIILILISQYMPHVIKGGKHVFARFAVIFSVAIVWLYAFFLTLGGAYNGVGTDTQ 249          

HSP 2 Score: 61.6178 bits (148), Expect = 2.311e-35
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 1
Query:    7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSII 171
            LVP MGG + +  ++IQ++LF++GLNTLLQT+FGTRLP V G S  F    +SI+
Sbjct:   57 LVPQMGGRNEEKAKLIQTILFVAGLNTLLQTVFGTRLPAVIGASYTFVPVTISIM 111          
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 2.311e-35
Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = 2
Query:  209 DRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFILERFALLFCIGVDWTFAAILTAAGAYN 565
            +RF  T+R++Q +LI++     V+G+ G      RF SP+  VPFV + GLGLF   FP +  C+E+GLP LVLL I  +Y   L     F+  R A+L  + + W +A ILTAAGAYN
Sbjct:  123 ERFVFTMRSLQGALIIAGVFQAVVGFFGIWRVFIRFLSPLAAVPFVTLTGLGLFFFAFPGVTKCIEVGLPALVLLVIFAEYASHLFAKGSFVFSRCAVLVTVVIIWIYAEILTAAGAYN 241          

HSP 2 Score: 66.6254 bits (161), Expect = 2.311e-35
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 1
Query:    7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSII 171
            +VPLMGGGH +   VIQ++LF+SG+NTLLQ  FGTRLP V   S  +  P ++II
Sbjct:   56 IVPLMGGGHAEKAIVIQTILFLSGINTLLQVHFGTRLPAVMSGSYTYIYPAVAII 110          
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.938e-33
Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 2
Query:  209 DRFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRLHPNAHFIL-------ERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586
            +RF  T+R+IQ +LI++    +++   G   N+ RF SP+ I P     GLGL+  GFPLL  CVE+GLP L+LL    QYL R       ++       +R+ ++ CI + W FA +LT++G Y++    T+
Sbjct:  132 ERFVRTMRSIQGALIITGCFQVLICILGVWRNIVRFLSPLSIAPLATFTGLGLYHIGFPLLARCVEVGLPGLILLIFVTQYLPRFLKMKKGVMILDGSRCDRYGMILCIPLVWLFAQLLTSSGVYDHKSHTTQ 264          

HSP 2 Score: 67.3958 bits (163), Expect = 5.938e-33
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 1
Query:    7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSII 171
            LVPLMGGG+ +  +VIQ+LLF+SGL TL Q+ FGTRLP +   S A+ +P+ SII
Sbjct:   65 LVPLMGGGYAEKVKVIQTLLFVSGLTTLFQSFFGTRLPVIAVASYAYIIPITSII 119          
BLAST of CN182030 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.225e-32
Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 2
Query:  212 RFRHTIRTIQRSLIVSSFINIVLGYSGA*GNLSRFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLEICQQYLKRL--HPNAHFILERFALLFCIGVDWTFAAILTAAGAYNNVPDQTK 586
            RF   +R IQ +LI++SF++I++G+SG   N++RF SP+  VP V   G GL+ +GFP+L  C+EIGLP ++LL I  QY+  L           RFA++F + + W +A ILT  GAY+N    T+
Sbjct:  133 RFEQIMRGIQGALIIASFLHILVGFSGLWRNVTRFLSPLSAVPLVAFSGFGLYEQGFPMLAKCIEIGLPEIILLVIFSQYIPHLMQGETCSNFFHRFAVIFSVVIVWLYAYILTIGGAYSNTEINTQ 259          

HSP 2 Score: 51.2174 bits (121), Expect = 2.225e-32
Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 1
Query:    7 LVPLMGGGHGDNGRVIQSLLFMSGLNTLLQTLFGTRLPKVKGPSAAFTLPVLSII--NDYND 186
            LV  +   + D  ++IQ+LLF+SG+NTL Q+ FGTRLP V G S ++    +SI+    YND
Sbjct:   65 LVSKIDARNEDKVKLIQTLLFVSGINTLFQSFFGTRLPAVIGASYSYVPTTMSIVLAARYND 126          
The following BLAST results are available for this feature:
BLAST of CN182030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
NAT3_ARATH4.308e-6366.40Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]
NAT1_ARATH3.095e-4854.69Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT2_ARATH1.645e-4649.60Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT4_ARATH6.365e-3945.67Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT6_ARATH1.521e-3742.06Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT7_ARATH9.682e-3741.27Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT5_ARATH2.311e-3541.27Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
LPE1_MAIZE2.311e-3543.70Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT10_ARATH5.938e-3336.84Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT8_ARATH2.225e-3242.52Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182030 ID=CN182030; Name=CN182030; organism=Citrus sinensis; type=EST; length=588bp
GGTACACTGGTGCCTCTAATGGGTGGGGGCCATGGAGATAATGGGCGAGT
GATTCAATCTTTGTTGTTCATGTCGGGTCTGAATACGCTGCTTCAAACAC
TTTTTGGGACAAGACTTCCTAAGGTGAAGGGTCCATCCGCTGCTTTCACC
CTGCCAGTATTGTCAATCATCAATGATTACAATGACGGGAGCTTCACATC
TGATGCATGATAGGTTTCGCCACACAATCAGAACTATTCAAAGATCACTT
ATAGTTTCTTCATTTATCAACATCGTGCTTGGATATAGTGGGGCCTGAGG
AAATTTATCAAGATTCTTTAGTCCCATTGTAATCGTACCATTTGTTTGTG
TGGTTGGGCTTGGTCTGTTCATGAGGGGCTTCCCTCTGCTTGGTAACTGC
GTGGAAATCGGCCTGCCTATGTTGGTTCTACTGGAGATTTGTCAACAGTA
TTTGAAGCGCTTACATCCGAACGCCCACTTTATACTTGAGAGGTTTGCTT
TGCTTTTCTGCATTGGAGTTGATTGGACTTTTGCTGCCATCCTCACTGCA
GCTGGTGCTTACAATAATGTTCCAGATCAAACTAAACT
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