CN182029

Overview
NameCN182029
Unique NameCN182029
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2300 contig Csv1_Contig2300:1..629. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 6.285e-81
Identity = 144/207 (69.57%), Postives = 170/207 (82.13%), Query Frame = 1
Query:    7 TLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSS 627
            TLV  MGG  GDK RVIQ++LFMSG+NTLLQTL GTRLPTVMG S A+ LPVLSII DYN+G F SE  RFRHT+RT+QGSLI+SSF+NI++GY  AWGNL R FSPI++VP V VV LGLF+RGFPLL NCVEIGLPML+LL+I QQYLK    +   I+ER+ALL C+ ++WAFAAILT +GAYNNV   TK SCRTDR++L+SS
Sbjct:   78 TLVSPMGGDPGDKARVIQTILFMSGINTLLQTLIGTRLPTVMGVSFAYVLPVLSIIRDYNNGQFDSEKQRFRHTMRTVQGSLIISSFVNIIIGYGQAWGNLIRIFSPIIVVPVVSVVSLGLFLRGFPLLANCVEIGLPMLILLIITQQYLKHAFSRISMILERYALLVCLAIIWAFAAILTVSGAYNNVSTATKQSCRTDRAFLMSS 284          
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 5.003e-62
Identity = 116/206 (56.31%), Postives = 154/206 (74.76%), Query Frame = 1
Query:   10 LVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSS 627
            LVP+MGG  GDK RV+Q+LLF+ G+NTLLQTLFGTRLPTV+G S AF +P++SII+D +         RF  T+R +QG++IV+S + I+LG+S  W   +RFFSPI +VP + + G GLF RGFP++GNCVEIGLPML+L VI  QYLK    +   +VERFAL+  + +VWA+A +LTA+GAY + P QT+L+CRTD S L+SS
Sbjct:   55 LVPMMGGDDGDKVRVVQTLLFLQGVNTLLQTLFGTRLPTVIGGSYAFMVPIISIIHDSSLTRIEDPQLRFLSTMRAVQGAIIVASSVQIILGFSQMWAICSRFFSPIGMVPVIALTGFGLFNRGFPVVGNCVEIGLPMLILFVIFSQYLKNFQFRQFPVVERFALIIALIIVWAYAHVLTASGAYKHRPHQTQLNCRTDMSNLISS 260          
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.003e-62
Identity = 116/207 (56.04%), Postives = 154/207 (74.40%), Query Frame = 1
Query:   10 LVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKRLHP-KAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSS 627
            LVP MGG  GD+ RVIQ+LLF++G+ TLLQ LFGTRLP V+G S A+ +P+  IIND +    +++H+RF HT+R IQG+LIV+S I I+LGYS  WG  +RFFSP+ + P V +VGLG+F RGFP LGNC+EIGLPML+L++   QYLK + P K   I ERF +L C+ +VW +A ILTA+GAY   P  T+ SCRTD++ L+S+
Sbjct:   50 LVPAMGGSDGDRARVIQTLLFVAGIKTLLQALFGTRLPAVVGGSLAYVVPIAYIINDSSLQKISNDHERFIHTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGMAPVVGLVGLGMFQRGFPQLGNCIEIGLPMLLLVIGLTQYLKHVRPFKDVPIFERFPILICVTIVWIYAVILTASGAYRGKPSLTQHSCRTDKANLIST 256          
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 106/206 (51.46%), Postives = 141/206 (68.45%), Query Frame = 1
Query:   10 LVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSS 627
            LVPLMGGG  +K  VI ++LF+SG+NTLLQ+LFG+RLP VMG S A+ +P L I   Y    +   H RF  T+R IQG+LI++S  ++++G+ G W  L RF SP+   P V + G+GL    FP L  C+EIGLP L++L+I  QYL  L      I E+FA+LF I +VWA+A ILTAAGAY+  P+ T+LSCRTDRS L+S+
Sbjct:   55 LVPLMGGGDVEKAEVINTVLFVSGINTLLQSLFGSRLPVVMGASYAYLIPALYITFSYRFTYYLHPHLRFEETMRAIQGALIIASISHMIMGFFGLWRILVRFLSPLSAAPLVILTGVGLLAFAFPQLARCIEIGLPALIILIILSQYLPHLFKCKRSICEQFAVLFTIAIVWAYAEILTAAGAYDKRPDNTQLSCRTDRSGLISA 260          
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.510e-50
Identity = 97/205 (47.32%), Postives = 135/205 (65.85%), Query Frame = 1
Query:   10 LVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLS 624
            LVP MGGG+ +K +++Q+LLF+SGLNTLLQ+ FGTRLP V+G S  +    LSII            ++F+  +R IQG+LIV+S + IV+G+SG W N+ R  SP+  VP V + G GL+  GFPLL  C+EIGLP ++LL++  QY+  L      +  RFA++F + +VW +A +LT  GAY N    T+ SCRTDRS L+S
Sbjct:   67 LVPQMGGGNEEKAKMVQTLLFVSGLNTLLQSFFGTRLPAVIGGSYTYVPTTLSIILAGRYSDILDPQEKFKRIMRGIQGALIVASILQIVVGFSGLWRNVVRLLSPLSAVPLVALAGFGLYEHGFPLLAKCIEIGLPEIILLLLFSQYIPHLIRGERQVFHRFAVIFSVVIVWIYAHLLTVGGAYKNTGVNTQTSCRTDRSGLIS 271          
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.510e-50
Identity = 97/206 (47.09%), Postives = 137/206 (66.50%), Query Frame = 1
Query:   10 LVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSS 627
            LVP MGGG+ +K +VIQ++LF++G+NTLLQTLFGTRLP V+G S  F    +SII        ++  DRF   +R  QG+LIV+S + ++LG+SG W N+ RF SPI  VP V +VG GL+  GFP +  C+EIGLP L++LV   QYL  +      + +RFA++F + +VW +A +LT  GAYN     T+ SCRTDR+ ++ +
Sbjct:   61 LVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPAVVGASYTFVPTTISIILSGRFSDTSNPIDRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFGLYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLLTVGGAYNGAAPTTQTSCRTDRAGIIGA 266          
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.284e-49
Identity = 94/206 (45.63%), Postives = 135/206 (65.53%), Query Frame = 1
Query:   10 LVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSS 627
            LVP MGG + +K ++IQ++LF++GLNTLLQT+FGTRLP V+G S  F    +SI+            +RF+  IR  QG+LIV+S + I+LG+SG W N+ RF SP+   P V +VG GL+  GFP +  C+EIGLP L++L++  QY+  +      +  RFA++F + +VW +A  LT  GAYN V   T+ SCRTDR+ L+S+
Sbjct:   57 LVPQMGGRNEEKAKLIQTILFVAGLNTLLQTVFGTRLPAVIGASYTFVPVTISIMLSGRFNDVADPVERFKRIIRATQGALIVASTLQIILGFSGLWRNVVRFLSPLSAAPLVGLVGYGLYELGFPGVAKCIEIGLPGLIILILISQYMPHVIKGGKHVFARFAVIFSVAIVWLYAFFLTLGGAYNGVGTDTQRSCRTDRAGLISA 262          
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.410e-48
Identity = 96/204 (47.06%), Postives = 129/204 (63.24%), Query Frame = 1
Query:   10 LVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLL 621
            +VPLMGGGH +K  VIQ++LF+SG+NTLLQ  FGTRLP VM  S  +  P ++II            +RF  T+R++QG+LI++     V+G+ G W    RF SP+  VPFV + GLGLF   FP +  C+E+GLP LVLLVI  +Y   L  K  F+  R A+L  + ++W +A ILTAAGAYN     T+ SCR DRS ++
Sbjct:   56 IVPLMGGGHAEKAIVIQTILFLSGINTLLQVHFGTRLPAVMSGSYTYIYPAVAIILSPRYALLIDPLERFVFTMRSLQGALIIAGVFQAVVGFFGIWRVFIRFLSPLAAVPFVTLTGLGLFFFAFPGVTKCIEVGLPALVLLVIFAEYASHLFAKGSFVFSRCAVLVTVVIIWIYAEILTAAGAYNERGPVTQFSCRADRSGII 259          
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.041e-47
Identity = 95/213 (44.60%), Postives = 138/213 (64.79%), Query Frame = 1
Query:   10 LVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKR-LHPKAHFIV------ERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSS 627
            LVPLMGGG+ +K +VIQ+LLF+SGL TL Q+ FGTRLP +   S A+ +P+ SII       +T   +RF  T+R+IQG+LI++    +++   G W N+ RF SP+ I P     GLGL+  GFPLL  CVE+GLP L+LL+   QYL R L  K   ++      +R+ ++ CI +VW FA +LT++G Y++    T+ SCRTDR+ L+++
Sbjct:   65 LVPLMGGGYAEKVKVIQTLLFVSGLTTLFQSFFGTRLPVIAVASYAYIIPITSIIYSTRFTYYTDPFERFVRTMRSIQGALIITGCFQVLICILGVWRNIVRFLSPLSIAPLATFTGLGLYHIGFPLLARCVEVGLPGLILLIFVTQYLPRFLKMKKGVMILDGSRCDRYGMILCIPLVWLFAQLLTSSGVYDHKSHTTQTSCRTDRTGLITN 277          
BLAST of CN182029 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.120e-45
Identity = 91/208 (43.75%), Postives = 134/208 (64.42%), Query Frame = 1
Query:   10 LVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYLKRL--HPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSS 627
            LV  +   + DK ++IQ+LLF+SG+NTL Q+ FGTRLP V+G S ++    +SI+             RF   +R IQG+LI++SF++I++G+SG W N+ RF SP+  VP V   G GL+ +GFP+L  C+EIGLP ++LLVI  QY+  L           RFA++F + +VW +A ILT  GAY+N    T++SCRTDR+ ++S+
Sbjct:   65 LVSKIDARNEDKVKLIQTLLFVSGINTLFQSFFGTRLPAVIGASYSYVPTTMSIVLAARYNDIMDPQKRFEQIMRGIQGALIIASFLHILVGFSGLWRNVTRFLSPLSAVPLVAFSGFGLYEQGFPMLAKCIEIGLPEIILLVIFSQYIPHLMQGETCSNFFHRFAVIFSVVIVWLYAYILTIGGAYSNTEINTQISCRTDRAGIISA 272          
The following BLAST results are available for this feature:
BLAST of CN182029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAT3_ARATH6.285e-8169.57Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]
NAT2_ARATH5.003e-6256.31Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT1_ARATH5.003e-6256.04Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT4_ARATH5.923e-5551.46Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT7_ARATH1.510e-5047.32Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT6_ARATH1.510e-5047.09Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH8.284e-4945.63Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
LPE1_MAIZE2.410e-4847.06Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT10_ARATH2.041e-4744.60Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT8_ARATH1.120e-4543.75Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001N12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182029 ID=CN182029; Name=CN182029; organism=Citrus sinensis; type=EST; length=628bp
GAGGGTACACTGGTGCCTCTAATGGGTGGGGGCCATGGTGATAAGGGGCG
AGTGATTCAATCTTTGTTGTTCATGTCGGGTCTGAATACGCTGCTTCAAA
CACTTTTTGGGACAAGACTTCCTACGGTGATGGGTCCATCCGCTGCTTTC
ACCCTGCCAGTATTGTCAATCATCAATGATTACAATGACGGGAGCTTCAC
ATCTGAGCATGATAGGTTTCGCCACACAATCAGAACTATTCAAGGATCAC
TTATAGTTTCTTCATTTATCAACATCGTGCTTGGATATAGTGGGGCCTGG
GGAAATTTAGCAAGATTCTTTAGTCCCATTGTAATCGTACCATTTGTTTG
TGTGGTTGGGCTTGGTCTGTTCATGAGGGGCTTCCCTCTGCTTGGTAACT
GCGTGGAAATCGGCCTGCCTATGTTGGTTCTACTGGTGATTTGTCAACAG
TATTTGAAGCGCTTACATCCGAAGGCCCACTTTATAGTTGAGAGGTTTGC
TTTGCTTTTCTGCATTGGAGTTGTTTGGGCTTTTGCTGCCATCCTCACTG
CAGCTGGTGCTTACAATAATGTTCCAGAGCAAACTAAACTGAGCTGCCGC
ACAGATCGTTCTTATCTTTTGTCTTCTG
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