CN182025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 262.692 bits (670), Expect = 1.112e-69 Identity = 126/141 (89.36%), Postives = 132/141 (93.62%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 428 L+PREL+SIFNDKELELLISGLPEID DDL+ANTEYT YTA S V+ WFWEV KAF+KEDMAR LQFVTGTSKVPLEGFKALQGISGPQ+ QIHKAYGAPERLPSAHTCFNQLDLPEY SKEQLQERLLLAIHEASEGFGF Sbjct: 3540 LIPRELVSIFNDKELELLISGLPEIDFDDLKANTEYTSYTAGSPVIHWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGAPERLPSAHTCFNQLDLPEYQSKEQLQERLLLAIHEASEGFGF 3680
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 2.739e-68 Identity = 122/141 (86.52%), Postives = 132/141 (93.62%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 428 L+PREL+SIFNDKELELLISGLPEID DDL+ANTEYT YT S V++WFWEV KAF+KEDMAR LQFVTGTSKVPLEGFKALQGISGPQ+ QIHKAYG+PERLPSAHTCFNQLDLPEY SKEQ+QERLLLAIHEA+EGFGF Sbjct: 3517 LIPRELVSIFNDKELELLISGLPEIDFDDLKANTEYTSYTVGSPVIRWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGSPERLPSAHTCFNQLDLPEYQSKEQVQERLLLAIHEANEGFGF 3657
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: PTR1_SCHPO (E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe GN=ptr1 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.737e-50 Identity = 91/141 (64.54%), Postives = 113/141 (80.14%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 428 ++P LI IFN++ELELLISGLPEID+DD + NTEY GY +S VQWFW ++F++E+ A+LLQF TGTSKVPL GFK L+G+SG Q+F IHK+YG+ RLP +HTCFNQLDLPEY + EQL+ LL AI+E SEGFGF Sbjct: 3086 IIPSHLIQIFNEQELELLISGLPEIDIDDWKNNTEYHGYNVSSPQVQWFWRAVRSFDEEERAKLLQFATGTSKVPLNGFKELEGMSGFQRFNIHKSYGSLNRLPQSHTCFNQLDLPEYDTYEQLRSMLLTAINEGSEGFGF 3226
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 3.148e-48 Identity = 86/141 (60.99%), Postives = 115/141 (81.56%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 428 ++P ELI+IFN++ELELLISGLP+ID+DD +ANTEY Y+A + +QWFW ++F+KE++A+LLQFVTGTSKVPL GFK L+G++G +F IH+ YG+ +RLPS+HTCFNQLDLPEY + E L+ +LL AI S+ FGF Sbjct: 3885 IIPEELIAIFNEQELELLISGLPDIDIDDWKANTEYHNYSAGAPQIQWFWRAVRSFDKEELAKLLQFVTGTSKVPLNGFKELEGMNGVSRFNIHRDYGSKDRLPSSHTCFNQLDLPEYENYETLRSQLLKAITAGSDYFGF 4025
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: HUWE1_RAT (E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus GN=Huwe1 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 7.754e-47 Identity = 88/140 (62.86%), Postives = 112/140 (80.00%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 425 ++P+ LISIF ++ELELLISGLP ID+DDL++NTEY Y + S +QWFW ++F++ D A+ LQFVTGTSKVPL+GF AL+G++G QKFQIH+ + +RLPSAHTCFNQLDLP Y S E+L+ LLLAI E SEGFG Sbjct: 181 IIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 320
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: HUWE1_MOUSE (E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus GN=Huwe1 PE=1 SV=4) HSP 1 Score: 186.808 bits (473), Expect = 7.754e-47 Identity = 88/140 (62.86%), Postives = 112/140 (80.00%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 425 ++P+ LISIF ++ELELLISGLP ID+DDL++NTEY Y + S +QWFW ++F++ D A+ LQFVTGTSKVPL+GF AL+G++G QKFQIH+ + +RLPSAHTCFNQLDLP Y S E+L+ LLLAI E SEGFG Sbjct: 4236 IIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 4375
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: HUWE1_HUMAN (E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 7.754e-47 Identity = 88/140 (62.86%), Postives = 112/140 (80.00%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 425 ++P+ LISIF ++ELELLISGLP ID+DDL++NTEY Y + S +QWFW ++F++ D A+ LQFVTGTSKVPL+GF AL+G++G QKFQIH+ + +RLPSAHTCFNQLDLP Y S E+L+ LLLAI E SEGFG Sbjct: 4233 IIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 4372
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: TOM1_ASHGO (Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii GN=TOM1 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.557e-45 Identity = 83/140 (59.29%), Postives = 109/140 (77.86%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 425 ++P++LISIF+++ELELL+SGLP+ID+DD + NT Y YT + +FW ++F+KE+ A+LLQFVTGTSKVPL GFK L G++G KF IH+ YG+ +RLPS+HTCFNQLDLP Y S E L+ LLLAI+E EGFG Sbjct: 3117 IIPKDLISIFDEQELELLVSGLPDIDVDDWKNNTIYVNYTPTCKQINYFWRAVRSFDKEERAKLLQFVTGTSKVPLNGFKELSGVNGISKFSIHRDYGSIDRLPSSHTCFNQLDLPAYDSYETLRGSLLLAINEGHEGFG 3256
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: TOM1_YEAST (E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae GN=TOM1 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.369e-43 Identity = 83/140 (59.29%), Postives = 108/140 (77.14%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 425 L+ ++LI+IF+++ELELLISGLP+ID+DD + NT Y YTA V +FW ++F+ E+ A+LLQFVTGTSKVPL GFK L G++G KF IH+ +G+ ERLPS+HTCFNQL+LP Y S E L+ LLLAI+E EGFG Sbjct: 3127 LISKDLITIFDEQELELLISGLPDIDVDDWKNNTTYVNYTATCKEVSYFWRAVRSFDAEERAKLLQFVTGTSKVPLNGFKELSGVNGVCKFSIHRDFGSSERLPSSHTCFNQLNLPPYESYETLRGSLLLAINEGHEGFG 3266
BLAST of CN182025 vs. ExPASy Swiss-Prot
Match: PUB3_SCHPO (E3 ubiquitin-protein ligase pub3 OS=Schizosaccharomyces pombe GN=pub3 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.261e-38 Identity = 72/140 (51.43%), Postives = 106/140 (75.71%), Query Frame = 3 Query: 6 LVPRELISIFNDKELELLISGLPEIDLDDLRANTEYTGYTAASTVVQWFWEVAKAFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 425 LV +L+++F+++ELELLI G+ ++D++D +++TEY Y A V++WFWE+ + ED ++LLQF TGTS++P+ GF+ LQG GP+KF I KA G P++LP AHTCFN+LDLP+Y SK+ L E+L LA+ E + GFG Sbjct: 647 LVSPDLVNVFDERELELLIGGISDVDVEDWKSHTEYRTYIATDPVIKWFWEIIAGWKNEDRSKLLQFATGTSRIPVNGFRDLQGSDGPRKFTIEKA-GTPDQLPVAHTCFNRLDLPDYPSKDTLHEKLSLAV-ENTVGFG 784 The following BLAST results are available for this feature:
BLAST of CN182025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182025 ID=CN182025; Name=CN182025; organism=Citrus sinensis; type=EST; length=629bpback to top |