CN188845

Overview
NameCN188845
Unique NameCN188845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188845 vs. ExPASy Swiss-Prot
Match: F10AL_ARATH (FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.381e-29
Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 2
Query:  275 DVMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALEV 547
            D +EPDNDP QKMGD SVEVT+E R+AA   K KA++ +SEG  ++AI  LT AI LNPTSAI+Y  RA VY+KL KPNAAIRDA  ALE+
Sbjct:   96 DTVEPDNDPPQKMGDSSVEVTDENREAAQEAKGKAMEALSEGNFDEAIEHLTRAITLNPTSAIMYGNRASVYIKLKKPNAAIRDANAALEI 186          

HSP 2 Score: 30.8018 bits (68), Expect = 3.381e-29
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  642 NPDSAKGYKIRGMA 683
            NPDSAKGYK RGMA
Sbjct:  187 NPDSAKGYKSRGMA 200          
BLAST of CN188845 vs. ExPASy Swiss-Prot
Match: F10A1_CHICK (Hsc70-interacting protein OS=Gallus gallus GN=ST13 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.273e-24
Identity = 54/93 (58.06%), Postives = 69/93 (74.19%), Query Frame = 2
Query:  269 NTDVMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALEV 547
            N  V+EPDND  Q+MGD +VEVTEEM D AN  K++A++ +SEG L+ A+   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+++
Sbjct:   83 NEGVIEPDNDDPQEMGDENVEVTEEMMDQANEKKMEAINALSEGDLQKAVNLFTDAIKLNPCLAILYAKRASVFVKLQKPNAAIRDCDRAIKI 175          

HSP 2 Score: 23.483 bits (49), Expect = 6.273e-24
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  642 NPDSAKGYKIRGMA 683
            NPDSA+ YK RG A
Sbjct:  176 NPDSAQTYKWRGKA 189          
BLAST of CN188845 vs. ExPASy Swiss-Prot
Match: F10A5_HUMAN (Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.233e-22
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 2
Query:  278 VMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALEV 547
            V+EPD D  Q+MGD +VE+TEEM D AN  K+ A++++++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAI+D   A+E+
Sbjct:   88 VIEPDTDAPQEMGDENVEITEEMMDQANDKKVAAIEVLNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIQDCDRAIEI 177          

HSP 2 Score: 23.483 bits (49), Expect = 4.233e-22
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  642 NPDSAKGYKIRGMA 683
            NPDSA+ YK RG A
Sbjct:  178 NPDSAQPYKWRGKA 191          
BLAST of CN188845 vs. ExPASy Swiss-Prot
Match: F10A1_MOUSE (Hsc70-interacting protein OS=Mus musculus GN=St13 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.163e-22
Identity = 51/93 (54.84%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  269 NTDVMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALEV 547
            N  V+EPD D  Q+MGD + E+TEEM D AN  K  A++ +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E+
Sbjct:   84 NEGVIEPDTDAPQEMGDENAEITEEMMDEANEKKGAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEI 176          

HSP 2 Score: 23.483 bits (49), Expect = 7.163e-22
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  642 NPDSAKGYKIRGMA 683
            NPDSA+ YK RG A
Sbjct:  177 NPDSAQPYKWRGKA 190          
BLAST of CN188845 vs. ExPASy Swiss-Prot
Match: F10A1_PONAB (Hsc70-interacting protein OS=Pongo abelii GN=ST13 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.165e-22
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 2
Query:  278 VMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALEV 547
            V+EPD D  Q+MGD + E+TEEM D AN  K+ A++ +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E+
Sbjct:   88 VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEI 177          

HSP 2 Score: 23.483 bits (49), Expect = 7.165e-22
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  642 NPDSAKGYKIRGMA 683
            NPDSA+ YK RG A
Sbjct:  178 NPDSAQPYKWRGKA 191          
BLAST of CN188845 vs. ExPASy Swiss-Prot
Match: F10A1_HUMAN (Hsc70-interacting protein OS=Homo sapiens GN=ST13 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.165e-22
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 2
Query:  278 VMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALEV 547
            V+EPD D  Q+MGD + E+TEEM D AN  K+ A++ +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E+
Sbjct:   88 VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEI 177          

HSP 2 Score: 23.483 bits (49), Expect = 7.165e-22
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  642 NPDSAKGYKIRGMA 683
            NPDSA+ YK RG A
Sbjct:  178 NPDSAQPYKWRGKA 191          
BLAST of CN188845 vs. ExPASy Swiss-Prot
Match: F10A4_HUMAN (Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.074e-21
Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 2
Query:  278 VMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALEV 547
            V+EPD D  Q+MGD + E+TEE+ D AN  K+ A++ +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E+
Sbjct:   84 VIEPDTDAPQEMGDENAEITEEVMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEI 173          

HSP 2 Score: 23.483 bits (49), Expect = 2.074e-21
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  642 NPDSAKGYKIRGMA 683
            NPDSA+ YK RG A
Sbjct:  174 NPDSAQPYKRRGKA 187          
BLAST of CN188845 vs. ExPASy Swiss-Prot
Match: F10A1_RAT (Hsc70-interacting protein OS=Rattus norvegicus GN=St13 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.944e-21
Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 2
Query:  269 NTDVMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALEV 547
            N  V+E D D  Q+MGD + E+TE M D AN  K  A+D +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E+
Sbjct:   84 NEGVIEADTDAPQEMGDENAEITEAMMDEANEKKGAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEI 176          

HSP 2 Score: 23.483 bits (49), Expect = 9.944e-21
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  642 NPDSAKGYKIRGMA 683
            NPDSA+ YK RG A
Sbjct:  177 NPDSAQPYKWRGKA 190          
The following BLAST results are available for this feature:
BLAST of CN188845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
F10AL_ARATH3.381e-2964.84FAM10 family protein At4g22670 OS=Arabidopsis thal... [more]
F10A1_CHICK6.273e-2458.06Hsc70-interacting protein OS=Gallus gallus GN=ST13... [more]
F10A5_HUMAN4.233e-2255.56Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV... [more]
F10A1_MOUSE7.163e-2254.84Hsc70-interacting protein OS=Mus musculus GN=St13 ... [more]
F10A1_PONAB7.165e-2255.56Hsc70-interacting protein OS=Pongo abelii GN=ST13 ... [more]
F10A1_HUMAN7.165e-2255.56Hsc70-interacting protein OS=Homo sapiens GN=ST13 ... [more]
F10A4_HUMAN2.074e-2154.44Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV... [more]
F10A1_RAT9.944e-2153.76Hsc70-interacting protein OS=Rattus norvegicus GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0006O08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006O08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188845 ID=CN188845; Name=CN188845; organism=Citrus sinensis; type=EST; length=684bp
CATTTATCACAACGTGGGCCACCTGCTGTTCCTGCTTGTCTAACTTGCAC
CTTCTACGCAGTTCCATAAAAATATATAGCAGAGATAAAGCTCTTGATCA
ACCCTACTGCAAATCAAAATCAATACCTTTTTTCAAGTCCTATCTTCATA
GAAAGAGGAAAAAAGTGGTGTTGACATGTCAGACTCTGTTAAGCATTTTG
AAGCAATGAAGTCCAATTTATCAACTGAAGATGATGACGACATTGTGGAG
TCTGATATTGAGTTGGATAATACTGATGTTATGGAGCCCGACAATGATCC
TTCACAAAAGATGGGAGACCCGTCAGTTGAAGTTACAGAAGAAATGCGTG
ATGCAGCAAATATGACAAAACTAAAAGCAGTAGATTTGATCTCTGAAGGC
AAGTTGGAGGATGCCATAGGACAACTAACAGAAGCCATAATGTTGAATCC
TACTTCAGCAATACTTTATGCAGCTCGAGCTGGTGTCTATGTTAAACTAA
ACAAACCTAATGCTGCAATTCGCGATGCTTATGTAGCTTTAGAGGTGGGT
GCCTGTTCCTTCATCTGTGCTTCTGCGGACTGCACATGAAGTGTCAATCT
GCTATTAGCAACCTAATTTTCTACATTTAATGTTATAGACTAACCCTGAC
TCAGCAAAAGGATATAAAATACGTGGGATGGCAA
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