CN182010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.716e-48 Identity = 100/193 (51.81%), Postives = 113/193 (58.55%), Query Frame = 2 Query: 5 AFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPV------ATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 AF N+NS +GLKKLDE+LLTRSYITGYQASKDDITV++ALSK P+SE+VNVSRW+ HIDALLRI +P+ LFG VL+D+KPWDDETDMKKLEEAVRS+QMEGL WGASKL PVGYGIKKL IM T Sbjct: 3 AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCT 195 HSP 2 Score: 30.0314 bits (66), Expect = 4.716e-48 Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 567 IVDDLVSVDTLIEEHL 614 IVDDLVS+DT+IEE L Sbjct: 196 IVDDLVSIDTMIEEQL 211
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.044e-47 Identity = 99/193 (51.30%), Postives = 112/193 (58.03%), Query Frame = 2 Query: 5 AFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPV------ATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 AF N+NS GLKKLDE+LLTRSYITGYQASKDDITV++AL+K P+S+YVN SRWY HIDALLRI AP+ LFG VL+D+KPWDDETDMKKLEEAV+S+QMEGL WGASKL PVGYGIKKLQI+ T Sbjct: 3 AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCT 195 HSP 2 Score: 30.0314 bits (66), Expect = 1.044e-47 Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 567 IVDDLVSVDTLIEEHL 614 IVDDLVS+DT+IEE L Sbjct: 196 IVDDLVSIDTMIEEQL 211
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 172.94 bits (437), Expect = 4.621e-45 Identity = 100/191 (52.36%), Postives = 111/191 (58.12%), Query Frame = 2 Query: 2 VAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXA-PVAT--XXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 V+F NV+S GLKKLDEYLLTRSYI+GYQAS DD+ VYSA S APSS Y NV+RW+ HIDALLR+ A P A+ LFG VLLDVKPWDDETDM KLEEAVR+V+MEGLLWGASKL PVGYGIKKLQIM+T Sbjct: 3 VSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMT 193 HSP 2 Score: 28.1054 bits (61), Expect = 4.621e-45 Identity = 12/17 (70.59%), Postives = 16/17 (94.12%), Query Frame = 3 Query: 561 LQIVDDLVSVDTLIEEH 611 + IVDDLVSVD+LIE++ Sbjct: 192 MTIVDDLVSVDSLIEDY 208
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 171.4 bits (433), Expect = 1.333e-44 Identity = 94/188 (50.00%), Postives = 108/188 (57.45%), Query Frame = 2 Query: 2 VAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPVATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 + NVNS GL+KLDEYLLTRSYI+GYQASKDD+TV+++L AP++ YVNV+RWY HI ALLR A + LFG VLLDVKPWDDETDM KLEEAVR+V+MEGLLWGASKL PVGYGIKKLQIM+T Sbjct: 3 ITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMT 190 HSP 2 Score: 28.1054 bits (61), Expect = 1.333e-44 Identity = 12/17 (70.59%), Postives = 16/17 (94.12%), Query Frame = 3 Query: 561 LQIVDDLVSVDTLIEEH 611 + IVDDLVSVD+LIE++ Sbjct: 189 MTIVDDLVSVDSLIEDY 205
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 1.738e-44 Identity = 93/188 (49.47%), Postives = 110/188 (58.51%), Query Frame = 2 Query: 2 VAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPVATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 V F +++S GL+KLDEYLL+RSYI+GYQASKDD+ V++AL+K PSS+YVNVSRWY H++ALLRI + LFG VLLDVKPWDDETDM KLEEAVRS++M+GLLWGASKL VGYGIKKLQIMLT Sbjct: 3 VTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEGSSVATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLT 190 HSP 2 Score: 29.261 bits (64), Expect = 1.738e-44 Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 561 LQIVDDLVSVDTLIEEHL 614 L IVDDLVSVD L+E++L Sbjct: 189 LTIVDDLVSVDDLVEDYL 206
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 1.695e-41 Identity = 99/193 (51.30%), Postives = 108/193 (55.96%), Query Frame = 2 Query: 2 VAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAP---VAT-XXXXXXXXXXXXXXXXXXXLFG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 V F +++S GL LD YLL+RSYITGYQASKDD+TV+SA+ KA + YVNVSRWYKHIDALLRI AP VAT LFG VLLDVKPWDDETDMKKLEEAVRSVQ EGL GASKL PVGYGIKKL IM+T Sbjct: 3 VTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKHIDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEKKAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMT 195 HSP 2 Score: 29.261 bits (64), Expect = 1.695e-41 Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 561 LQIVDDLVSVDTLIEEHL 614 + IVDDLVSVD LIE++L Sbjct: 194 MTIVDDLVSVDNLIEDYL 211
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 1.053e-30 Identity = 74/190 (38.95%), Postives = 93/190 (48.95%), Query Frame = 2 Query: 2 VAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPV--ATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 V F ++++ GLK L+E+L ++YI+G Q S DD+ VY+A+ + P + N S+WY + + L AP A LF VLL+VKPWDDETDMKKLEEAVRSVQM GL WGASKL PVGYGIKKL IM+T Sbjct: 3 VTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFPGKADGVRVGGGVAPPSEAHPHTEEPAADGDGDDDDDIDLFADETEDEKKAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMT 192 HSP 2 Score: 31.5722 bits (70), Expect = 1.053e-30 Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 561 LQIVDDLVSVDTLIEEHL 614 + IVDDLVSVD LIE+HL Sbjct: 191 MTIVDDLVSVDNLIEDHL 208
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.194e-29 Identity = 69/188 (36.70%), Postives = 93/188 (49.47%), Query Frame = 2 Query: 2 VAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPVATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 V F ++++ G+K ++E+L ++YI+G Q S DD+ VY+A+ PS + N S+WY+ + + ++ + A LFG VL+DVKPWDDETDMKKLEEAVR V+M GL WGASKL PVGYGIKKL IM T Sbjct: 3 VTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVAS--QLAKSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFT 188 HSP 2 Score: 25.409 bits (54), Expect = 7.194e-29 Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 567 IVDDLVSVDTLIEEHL 614 IVDDLVS D LIE+ L Sbjct: 189 IVDDLVSPDNLIEDFL 204
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 1.509e-25 Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 VLLDVKPWDDETDMKKLEEAVRSVQMEGL WGASKL PVGYGIKKLQIMLT Sbjct: 138 VLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLT 188 HSP 2 Score: 33.8834 bits (76), Expect = 1.509e-25 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 561 LQIVDDLVSVDTLIEEHL 614 L IVDDLVSVD+LIEEHL Sbjct: 187 LTIVDDLVSVDSLIEEHL 204
BLAST of CN182010 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 9.053e-21 Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 2 Query: 413 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 565 VL+D+KPWDDETDMKKLEEAVRSVQMEGL WGASKL PVGYGIKKLQIMLT Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLT 182 The following BLAST results are available for this feature:
BLAST of CN182010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182010 ID=CN182010; Name=CN182010; organism=Citrus sinensis; type=EST; length=614bpback to top |