CN182005

Overview
NameCN182005
Unique NameCN182005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1784..2409. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 4.596e-52
Identity = 99/114 (86.84%), Postives = 108/114 (94.74%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            E+TVR LQRT+PAAVPA+VFLSGGQSEEEAT NLNAMN+L TKKPWSLSFSFGRALQQSTLKAW+GK EN++KA+AAFL RCKANSEATLGTYKGDA LGEGA+ESLHVKDYKY
Sbjct:  245 EYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 98/114 (85.96%), Postives = 107/114 (93.86%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            EHTVRALQRT+PAAVPAVVFLSGGQSEEEAT NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW+GKEENV+ AQ A L R KANSEATLGTYKG++QLGEGA+ESLHVKDYKY
Sbjct:  246 EHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.998e-47
Identity = 94/114 (82.46%), Postives = 102/114 (89.47%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            EHTVRALQRT+PAAVPAVVFLSGGQSEEEA+ NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW GK ENV+ AQ A L R KANSEATLGTYKG + LG GA+ESLHVKDYKY
Sbjct:  246 EHTVRALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.409e-47
Identity = 95/114 (83.33%), Postives = 102/114 (89.47%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            E+TVR LQRT+PAAVPAV+FLSGGQSEEEATRNLNAMN+L TKKPWSLSFSFGRALQ STLKAWAGK EN++KA+AAFL RCKANSEATLGTYKGDA       ESLHVKDYKY
Sbjct:  245 EYTVRTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDA---AADTESLHVKDYKY 355          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.094e-43
Identity = 88/114 (77.19%), Postives = 97/114 (85.09%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            E+TVR LQRT+P AVP V+FLSGGQSEEEAT NLNAMN+L+TKKPW+LSFS+GRALQQSTLKAW GKEENV KAQ  FL R K NSEATLG Y+G A  G  A+ESLHVKDYKY
Sbjct:  245 EYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.639e-41
Identity = 85/115 (73.91%), Postives = 96/115 (83.48%), Query Frame = 3
Query:    3 GEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            GE+TV AL+RT+PAAVP +VFLSGGQSEE+AT NLNAMN+    KPW+LSFSFGRALQQSTLK W+GK+ENV KAQ  FL RCKANSEATLG Y G +  G  A+ESLHVKDYKY
Sbjct:  244 GEYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.322e-34
Identity = 73/114 (64.04%), Postives = 86/114 (75.44%), Query Frame = 3
Query:    6 EHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            E+TV AL+RT+P A+P +VFLSG Q EE+AT NLNAMN+L   KPW+L+FSFG ALQQS +KAWAGK ENV KAQA FL RCKAN +ATLG Y G A     A E+L V  Y+Y
Sbjct:  245 EYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.842e-31
Identity = 67/115 (58.26%), Postives = 84/115 (73.04%), Query Frame = 3
Query:    3 GEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            G  TV ALQR +P+AVP VVFLSGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK+EN+  AQ   L R + NS A++G Y GDA     A++SL V ++ Y
Sbjct:  252 GLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.102e-29
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV ALQRT+P AVP VVFLSGGQSE +ATRNLNA+N+   KKPW+LSFSFGRALQ S + AW GK ENV+  QA FL   KAN  A+LG ++G+ +   G  +SL V ++ Y
Sbjct:  253 TVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAG-QKSLFVANHAY 363          
BLAST of CN182005 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.102e-29
Identity = 64/112 (57.14%), Postives = 78/112 (69.64%), Query Frame = 3
Query:   12 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 347
            TV AL+RT+PAAVP + FLSGGQSEEEA+ NLNAMNQL   +PW LSFS+GRALQ S L AW G+  N + +Q AF+ R K NS A+ G YK   Q G+ + +SL    Y Y
Sbjct:  253 TVTALRRTVPAAVPGICFLSGGQSEEEASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASKGEYKPSGQAGQASTQSLFTASYTY 364          
The following BLAST results are available for this feature:
BLAST of CN182005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_ORYSJ4.596e-5286.84Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR2.522e-5085.96Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA1.998e-4782.46Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE3.409e-4783.33Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL5.094e-4377.19Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA1.639e-4173.91Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH4.322e-3464.04Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_CAEEL5.842e-3158.26Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF_ECHMU1.102e-2959.82Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALDOB_DANRE1.102e-2957.14Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182005 ID=CN182005; Name=CN182005; organism=Citrus sinensis; type=EST; length=623bp
GAGGTGAACACACTGTCCGGGCCCTGCAACGCACTATGCCTGCAGCAGTT
CCTGCTGTTGTGTTCTTGTCTGGTGGGCAGAGTGAGGAGGAGGCTACCCG
CAACCTTAATGCCATGAACCAGCTCAAGACGAAGAAGCCATGGTCACTTT
CCTTTTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCAAGGCATGGGCT
GGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTCCTTGTCAGGTG
CAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGGCGATGCCCAGC
TTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACTACAAATACTAA
GCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTTATGAGAGTAAA
TGGCGGTATGAACATTAGGTTGGCACATTCTCATTCATAGTTTTAGGGCT
TTTTCATATTAGGTGGAGCAATAAAAAGCTTGGGAACTTCGGTTTGAGTG
GTTTTGATCAAAACTAAACTGAAAACTGTTTATGCTTTTGTTTTTGTTTT
TTTTTTCCTTTTCCCCTAATGGCGCTAAATTTCTGTGATTTTGTCACATA
ATTGATAATGTTTTCTTGTGCTT
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