CN188837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: RBP1C_ARATH (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 7.830e-70 Identity = 127/160 (79.38%), Postives = 145/160 (90.62%), Query Frame = 2 Query: 212 MASTT-EGDHREEEAPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHEVAESQK 688 MAST E ++RE+E NEDEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+K+YRFDK+GNQWKERGAGTVKLLKHK TGKVRLVMRQSKTLKICANHL+ MSVQEH+GN+KSC+WHA D++DGELKDELFCIRF S+ENCK+FME E+AESQ+ Sbjct: 1 MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQ 160
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: RBP1A_ARATH (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana GN=RANBP1A PE=1 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.477e-68 Identity = 126/156 (80.77%), Postives = 139/156 (89.10%), Query Frame = 2 Query: 227 EGDHR-EEEAPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHEVAESQKK 691 E +HR EEEA NEDEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+KLYRFDKD NQWKERGAGTVK LKHK TGK+RLVMRQSKTLKICANH V MSVQEH GN+KSCVWHA D+ADGELKDELFCIRF S+ENCK+FM+ EVAES+++ Sbjct: 7 EHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEE 162
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: RBP1B_ARATH (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana GN=RANBP1B PE=1 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 3.290e-68 Identity = 126/162 (77.78%), Postives = 145/162 (89.51%), Query Frame = 2 Query: 209 AMASTTEGDHR-EEEAPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHEVAESQKK 691 ++++ E ++R EEE NEDEDTGAQVAPIV+LEEVAVTTGEEDED ILDLK+KLYRFDKDG+QWKERGAGTVK LKH+V+GK+RLVMRQSKTLKICANHLV MSVQEHAGNDKSCVWHA D++DGELKDELFCIRF SVENCK+FM+ EVAES+++ Sbjct: 3 SISNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEE 164
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: YRB1_YEAST (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae GN=YRB1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.909e-32 Identity = 74/170 (43.53%), Postives = 103/170 (60.59%), Query Frame = 2 Query: 194 GKKSEAMASTTEGDHREEEAPHNED---EDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWH-AADYADGELKDELFCIRFGSVENCKSFMEMVHEVAESQKK 691 GKK+E + + + +EE D E P+V LE+V V T EEDE+ + ++AKL+RFD D +WKERG G K LK+K T KVR++MR+ KTLKICANH++ P +++ + G+D+S V+ AD A+GE + F IRFGS EN F E + E KK Sbjct: 31 GKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKK 200
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: RANG_SCHPO (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe GN=sbp1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.909e-32 Identity = 73/156 (46.79%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 242 EEEAPHNEDEDTG-----AQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWH-AADYADGELKDELFCIRFGSVENCKSFMEMVHEVAESQKK 691 +E+ P DED PIVKL V T EE+E ++AKL+RFDK ++WKERG G +LLKHK TGK RLVMR+ KTLK+CANHL++P M + + G+D+S VW AAD ++GE E F IRF + EN F E + E K Sbjct: 55 DEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAASEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTVAADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.962e-32 Identity = 70/167 (41.92%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 158 TDRSHTNESPSTGKKSEAMASTTEGDHREEE-APHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSF 652 +D T P T +H + + H +D+D G P+V L +++ V TGEEDE+ +AKL+RFD + +WKERG G VK+L+HK +GK+RL+MR+ + LKICANH + P M + +AG+D+S VWHA DYAD K E IRF + E F Sbjct: 1128 SDDMFTFHGPGKSVFGTPTLETANKNHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALF 1294 HSP 2 Score: 126.716 bits (317), Expect = 1.144e-28 Identity = 66/171 (38.60%), Postives = 100/171 (58.48%), Query Frame = 2 Query: 182 SPSTGKKSEAMASTTEGDHREEEAPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHEVAESQKK 691 SPS + T+ G E + E+ D G P+V L + V V++GEE+E + +AKLYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P M++Q G ++ +W A D+ADGE K E +RF + SF ++ E +Q+K Sbjct: 2276 SPSKSPAKLNQSGTSVGTDEESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWLWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 2445 HSP 3 Score: 124.405 bits (311), Expect = 5.677e-28 Identity = 66/168 (39.29%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 188 STGKKSEAMASTTEGDHREEEAPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHEVAESQKK 691 S G +S E D +EE HNED PIV L EV V +GEEDE+ + +AKLYR+D+D +QWKERG G +K+L H + R++MR+ + K+CANH++ M ++ ++ + VW A+DYADGE K E +RF + E F + E ++ K Sbjct: 2884 SVGTQSAGKVGEDE-DGSDEEVVHNED----IHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHTMKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEVADCFKKTFEECQQNLMK 3046 HSP 4 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 55/155 (35.48%), Postives = 99/155 (63.87%), Query Frame = 2 Query: 209 AMASTTEGDHREEEAPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHE 670 A + T GD +++ + ++ P+V++ E+V + TGEEDE + + KL+RFD + +QWKERG G +K+LK++V GK+R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + E + F + E Sbjct: 1987 ANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEE 2141
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32 Identity = 65/133 (48.87%), Postives = 89/133 (66.92%), Query Frame = 2 Query: 257 HNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSF 652 H ++ED G P+V L +++ V TGEEDE+ +AKL+RFD + +WKERG G VK+L+HK +GK+RL+MR+ + LKICANH + P M + +AG+D+S VWHA DYAD K E IRF + E F Sbjct: 1156 HGDEEDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDGESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALF 1288 HSP 2 Score: 125.946 bits (315), Expect = 1.951e-28 Identity = 69/177 (38.98%), Postives = 105/177 (59.32%), Query Frame = 2 Query: 164 RSHTNESPSTGKKSEAMASTTEGDHREEEAPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHEVAESQKK 691 +S + S S K +++ AS G E + E+ D G P+V L + V V++GEE+E + +AKLYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P M++Q G ++ VW A D+ADGE K E +RF + SF ++ E +Q+K Sbjct: 2109 KSALSPSKSPAKLNQSGASV--GTDEESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQTMKGTERVWVWTACDFADGERKIEHLAVRFKLQDVADSFKKIFDEAKTAQEK 2282 HSP 3 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 61/164 (37.20%), Postives = 106/164 (64.63%), Query Frame = 2 Query: 182 SPSTGKKSEAMASTTEGDHREEEAPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHE 670 S +GK +E A+T+ ++++A ED D P+V++ E+V + TGEEDE + + KL+RFD + +QWKERG G +K+LK++V GK+R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + E + F + E Sbjct: 1817 SSQSGKVAEK-ANTSSDLEKDDDAYKTEDSDD-IHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEE 1978 HSP 4 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 64/159 (40.25%), Postives = 96/159 (60.38%), Query Frame = 2 Query: 188 STGKKSEAMASTTEG----DHREEEAPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSF 652 +TG +T++G D +E+ HNED PIV L EV V +GEEDE+ + +AKLYR+D+D +QWKERG G +K+L H + R++MR+ + K+CANH++ M ++ ++ + VW A+DYADGE K E +RF + E +SF Sbjct: 2708 NTGAAVFGTQTTSKGGEDEDGSDEDVVHNED----IHFEPIVSLPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIGDIKILWHTMKKYYRILMRRDQVFKVCANHVITKAMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEMTESF 2862
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: RANG_BOVIN (Ran-specific GTPase-activating protein OS=Bos taurus GN=RANBP1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31 Identity = 78/169 (46.15%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 209 AMASTTEGDHREEEAPHNEDEDT-GAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF--DKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELKDELFCIRFGSVENCKSFM----EMVHEVAESQKK 691 A A T DH + + N DE Q PIV L E + T EEDE+ + ++AKL+RF + D +WKERG G VKLLKHK G +RL+MR+ KTLKICANH + PMM ++ +AG+D++ VW+ AD+AD K EL IRF + EN + F E E+ E +KK Sbjct: 2 AAAKDTHEDH--DTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKQELLAIRFLNAENAQKFKTKFEECRKEIEEKEKK 168
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: RANG_HUMAN (Ran-specific GTPase-activating protein OS=Homo sapiens GN=RANBP1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31 Identity = 78/169 (46.15%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 209 AMASTTEGDHREEEAPHNEDEDT-GAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF--DKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELKDELFCIRFGSVENCKSFM----EMVHEVAESQKK 691 A A T DH + + N DE Q PIV L E + T EEDE+ + ++AKL+RF + D +WKERG G VKLLKHK G +RL+MR+ KTLKICANH + PMM ++ +AG+D++ VW+ AD+AD K EL IRF + EN + F E E+ E +KK Sbjct: 2 AAAKDTHEDH--DTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKK 168
BLAST of CN188837 vs. ExPASy Swiss-Prot
Match: RANG_MOUSE (Ran-specific GTPase-activating protein OS=Mus musculus GN=Ranbp1 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.164e-31 Identity = 75/168 (44.64%), Postives = 103/168 (61.31%), Query Frame = 2 Query: 212 MASTTEGDHREEEAPHNEDEDT-GAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF--DKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELKDELFCIRFGSVENCKSFM----EMVHEVAESQKK 691 MA+ + + + N DE Q PIV L E + T EEDE+ + ++AKL+RF + D +WKERG G VKLLKHK G +RL+MR+ KTLKICANH + PMM ++ +AG+D++ VW+ AD+AD K EL IRF + EN + F E E+ E +KK Sbjct: 1 MAAAKDSHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKK 168 The following BLAST results are available for this feature:
BLAST of CN188837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188837 ID=CN188837; Name=CN188837; organism=Citrus sinensis; type=EST; length=692bpback to top |