CN181984

Overview
NameCN181984
Unique NameCN181984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL1_ARATH (4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.411e-56
Identity = 110/156 (70.51%), Postives = 124/156 (79.49%), Query Frame = -2
Query:  104 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMRK 571
            ELCVRSQCVMQGY+ N+EET +TID+ GWLHT                 IKELIKYKGFQVAPAELEAILLTHPSVED AVV LPDEEAGEIPAACVV+NP A E E+DI++FVA+NVA YKKVR +HFVD IPKS SGKIMRR+L+DK+L   +K
Sbjct:  387 ELCVRSQCVMQGYFMNKEETDKTIDEQGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDVAVVPLPDEEAGEIPAACVVINPKATEKEEDILNFVAANVAHYKKVRAVHFVDSIPKSLSGKIMRRLLRDKILSINKK 542          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 5.275e-49
Identity = 96/155 (61.94%), Postives = 116/155 (74.84%), Query Frame = -2
Query:  107 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMR 571
            ELCVRSQ VMQGYY  +EET RT+D  GWLHT                 IKELIKYKGFQVAPAELEA+LL+HPSVEDAAV  +PDEEAGE+P ACVV    A+E E++I+ +VA  VA+YK+VRVLH VD IPKS SGKI+RR L+D+ +++M+
Sbjct:  398 ELCVRSQSVMQGYYKRKEETERTVDGKGWLHTGDVGYIDGDGDVFIVDRIKELIKYKGFQVAPAELEAVLLSHPSVEDAAVFGVPDEEAGEVPVACVVRRHGAEEGEEEIVAYVAERVASYKRVRVLHIVDAIPKSVSGKILRRQLRDEFIKRMK 552          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.208e-38
Identity = 76/150 (50.67%), Postives = 104/150 (69.33%), Query Frame = -2
Query:  122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571
            E+C+R   +M+GY N+ E TARTIDK GWL+T                 +KELIKYKGFQVAPAELEA+LL HP++ DAAVV + DE+AGE+P A VV +  +  +ED++ DF++  V  YK+++ + FVD IPKS SGKI+R+ L+ K+
Sbjct:  387 EICIRGDQIMKGYLNDPEATARTIDKEGWLYTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVDAIPKSPSGKILRKDLRAKL 536          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.547e-37
Identity = 73/150 (48.67%), Postives = 103/150 (68.67%), Query Frame = -2
Query:  122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571
            E+C+R   +M+GY N+ E T RTIDK GWLHT                 +KELIKYKGFQVAPAE+EA+LL HP++ DAAVV + DE+AGE+P A VV +  +  +ED++ DF++  V  YK+V+ + FV+ +PKS SGKI+R+ L+ ++
Sbjct:  392 EICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKYKGFQVAPAEIEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDLRARL 541          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL1_SOYBN (4-coumarate--CoA ligase 1 (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.632e-37
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = -2
Query:  104 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVM-NPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMRK 571
            E+C+R   +M+GY N+ E T RTIDK+GWLHT                 +KELIKYKGFQVAPAELEA+LLTHP + DAAVV + DE AGE+P A VV+ N     +ED+I  F++  V  YK++  + F+D IPKS SGKI+R+ L+ K+   + K
Sbjct:  137 EICIRGDQIMKGYLNDGEATERTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPKISDAAVVPMKDEAAGEVPVAFVVISNGYTDTTEDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKIAASVPK 293          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36
Identity = 75/150 (50.00%), Postives = 100/150 (66.67%), Query Frame = -2
Query:  122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571
            E+C+R   +M+GY N+ E TARTIDK GWLHT                 +KELIKYKGFQVAPAELEA+LLTHP + DAAVV + DE AGE+P A VV +     +ED+I  F++  V  YK++  + FV+ IPK+ SGKI+R+ L+ ++
Sbjct:  396 EICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPCISDAAVVPMKDEAAGEVPVAFVVKSNGHNITEDEIKQFISKQVIFYKRINRVFFVEAIPKAPSGKILRKDLRARL 545          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36
Identity = 72/150 (48.00%), Postives = 103/150 (68.67%), Query Frame = -2
Query:  122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571
            E+C+R   +M+GY N+ E TARTI+K GWLHT                 +KELIKYKGFQVAPAELEA+L+ HP + DAAVV + DE+AGE+P A VV +  +  +ED++ DF++  V  YK+++ + FV+ +PKS SGKI+R+ L+ ++
Sbjct:  390 EICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARL 539          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36
Identity = 72/150 (48.00%), Postives = 103/150 (68.67%), Query Frame = -2
Query:  122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571
            E+C+R   +M+GY N+ E TARTI+K GWLHT                 +KELIKYKGFQVAPAELEA+L+ HP + DAAVV + DE+AGE+P A VV +  +  +ED++ DF++  V  YK+++ + FV+ +PKS SGKI+R+ L+ ++
Sbjct:  390 EICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARL 539          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL1_ARATH (4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.121e-36
Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = -2
Query:  122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571
            E+C+R   +M+GY NN   TA TIDK+GWLHT                 +KELIKYKGFQVAPAELEA+L+ HP + D AVV++ +E AGE+P A VV + +++ SEDD+  FV+  V  YK++  + F + IPK+ SGKI+R+ L+ K+
Sbjct:  408 EICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKL 557          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.735e-36
Identity = 77/153 (50.33%), Postives = 102/153 (66.67%), Query Frame = -2
Query:  113 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 571
            E+C+R   +M+GY N+ E TA TID+ GWLHT                 +KE+IKYKGFQVAPAELEA+L+ HPS+ DAAVV    EEAGE+P A VV   +++ SE +I +FVA  V  YKK+  ++FVD IPKS SGKI+R+ L+ ++  K
Sbjct:  387 EICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVEYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVV--KSSEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 537          
The following BLAST results are available for this feature:
BLAST of CN181984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
4CLL1_ARATH3.411e-5670.514-coumarate--CoA ligase-like 1 OS=Arabidopsis thal... [more]
4CLL9_ORYSJ5.275e-4961.944-coumarate--CoA ligase-like 9 OS=Oryza sativa sub... [more]
4CL2_TOBAC3.208e-3850.674-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=... [more]
4CL1_TOBAC3.547e-3748.674-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=... [more]
4CL1_SOYBN4.632e-3749.684-coumarate--CoA ligase 1 (Fragment) OS=Glycine ma... [more]
4CL_VANPL1.032e-3650.004-coumarate--CoA ligase OS=Vanilla planifolia GN=4... [more]
4CL2_SOLTU1.032e-3648.004-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=... [more]
4CL1_SOLTU1.032e-3648.004-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=... [more]
4CL1_ARATH5.121e-3648.004-coumarate--CoA ligase 1 OS=Arabidopsis thaliana ... [more]
4CL_PINTA8.735e-3650.334-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M08_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181984 ID=CN181984; Name=CN181984; organism=Citrus sinensis; type=EST; length=572bp
TATCGAAGGACACAAAGTTAACACATAGAGCGATGAATGTTAAGCATCCA
ACAACAAGTGATCAAAGGGGAGAAAATTAATAAGCCGGCTGCGTCAGATT
TCACTTTCGCATCTTCTCAAGCATCTTGTCTTTGAGAATCCTTCTCATTA
TTTTCCCAGAGTGAGACTTTGGGATGCCATCCACAAAGTGCAAGACTCTC
ACTTTCTTATAAGTTGCAACGTTGGAGGCCACGAAGTCCATAATATCATC
TTCACTTTCTTTGGCATTTGGGTTCATCACGACACAGGCGGCTGGGATTT
CCCCCGCCTCTTCATCAGGCAGCGACACAACCGCAGCATCTTCAACCGAG
GGATGAGTTAAAAGGATGGCTTCAAGCTCAGCCGGGGCTACTTGAAACCC
CTTGTACTTGATTAACTCTTTGATGCGATCAACAATAAAAATATCTCCGT
CATCATCTATGTATCCAATGTCACCGGTATGTAGCCACCCATTCTTGTCA
ATGGTCCTTGCAGTTTCCTCTTCATTGTTATAGTAACCTTGCATTACACA
TTGACTTCTGACGCAAAGCTCA
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