CN181984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL1_ARATH (4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.411e-56 Identity = 110/156 (70.51%), Postives = 124/156 (79.49%), Query Frame = -2 Query: 104 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMRK 571 ELCVRSQCVMQGY+ N+EET +TID+ GWLHT IKELIKYKGFQVAPAELEAILLTHPSVED AVV LPDEEAGEIPAACVV+NP A E E+DI++FVA+NVA YKKVR +HFVD IPKS SGKIMRR+L+DK+L +K Sbjct: 387 ELCVRSQCVMQGYFMNKEETDKTIDEQGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDVAVVPLPDEEAGEIPAACVVINPKATEKEEDILNFVAANVAHYKKVRAVHFVDSIPKSLSGKIMRRLLRDKILSINKK 542
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 5.275e-49 Identity = 96/155 (61.94%), Postives = 116/155 (74.84%), Query Frame = -2 Query: 107 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMR 571 ELCVRSQ VMQGYY +EET RT+D GWLHT IKELIKYKGFQVAPAELEA+LL+HPSVEDAAV +PDEEAGE+P ACVV A+E E++I+ +VA VA+YK+VRVLH VD IPKS SGKI+RR L+D+ +++M+ Sbjct: 398 ELCVRSQSVMQGYYKRKEETERTVDGKGWLHTGDVGYIDGDGDVFIVDRIKELIKYKGFQVAPAELEAVLLSHPSVEDAAVFGVPDEEAGEVPVACVVRRHGAEEGEEEIVAYVAERVASYKRVRVLHIVDAIPKSVSGKILRRQLRDEFIKRMK 552
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.208e-38 Identity = 76/150 (50.67%), Postives = 104/150 (69.33%), Query Frame = -2 Query: 122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571 E+C+R +M+GY N+ E TARTIDK GWL+T +KELIKYKGFQVAPAELEA+LL HP++ DAAVV + DE+AGE+P A VV + + +ED++ DF++ V YK+++ + FVD IPKS SGKI+R+ L+ K+ Sbjct: 387 EICIRGDQIMKGYLNDPEATARTIDKEGWLYTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVDAIPKSPSGKILRKDLRAKL 536
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.547e-37 Identity = 73/150 (48.67%), Postives = 103/150 (68.67%), Query Frame = -2 Query: 122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571 E+C+R +M+GY N+ E T RTIDK GWLHT +KELIKYKGFQVAPAE+EA+LL HP++ DAAVV + DE+AGE+P A VV + + +ED++ DF++ V YK+V+ + FV+ +PKS SGKI+R+ L+ ++ Sbjct: 392 EICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKYKGFQVAPAEIEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDLRARL 541
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL1_SOYBN (4-coumarate--CoA ligase 1 (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.632e-37 Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = -2 Query: 104 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVM-NPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMRK 571 E+C+R +M+GY N+ E T RTIDK+GWLHT +KELIKYKGFQVAPAELEA+LLTHP + DAAVV + DE AGE+P A VV+ N +ED+I F++ V YK++ + F+D IPKS SGKI+R+ L+ K+ + K Sbjct: 137 EICIRGDQIMKGYLNDGEATERTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPKISDAAVVPMKDEAAGEVPVAFVVISNGYTDTTEDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKIAASVPK 293
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36 Identity = 75/150 (50.00%), Postives = 100/150 (66.67%), Query Frame = -2 Query: 122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571 E+C+R +M+GY N+ E TARTIDK GWLHT +KELIKYKGFQVAPAELEA+LLTHP + DAAVV + DE AGE+P A VV + +ED+I F++ V YK++ + FV+ IPK+ SGKI+R+ L+ ++ Sbjct: 396 EICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPCISDAAVVPMKDEAAGEVPVAFVVKSNGHNITEDEIKQFISKQVIFYKRINRVFFVEAIPKAPSGKILRKDLRARL 545
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36 Identity = 72/150 (48.00%), Postives = 103/150 (68.67%), Query Frame = -2 Query: 122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571 E+C+R +M+GY N+ E TARTI+K GWLHT +KELIKYKGFQVAPAELEA+L+ HP + DAAVV + DE+AGE+P A VV + + +ED++ DF++ V YK+++ + FV+ +PKS SGKI+R+ L+ ++ Sbjct: 390 EICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARL 539
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36 Identity = 72/150 (48.00%), Postives = 103/150 (68.67%), Query Frame = -2 Query: 122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571 E+C+R +M+GY N+ E TARTI+K GWLHT +KELIKYKGFQVAPAELEA+L+ HP + DAAVV + DE+AGE+P A VV + + +ED++ DF++ V YK+++ + FV+ +PKS SGKI+R+ L+ ++ Sbjct: 390 EICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARL 539
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL1_ARATH (4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.121e-36 Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = -2 Query: 122 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 571 E+C+R +M+GY NN TA TIDK+GWLHT +KELIKYKGFQVAPAELEA+L+ HP + D AVV++ +E AGE+P A VV + +++ SEDD+ FV+ V YK++ + F + IPK+ SGKI+R+ L+ K+ Sbjct: 408 EICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKL 557
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.735e-36 Identity = 77/153 (50.33%), Postives = 102/153 (66.67%), Query Frame = -2 Query: 113 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 571 E+C+R +M+GY N+ E TA TID+ GWLHT +KE+IKYKGFQVAPAELEA+L+ HPS+ DAAVV EEAGE+P A VV +++ SE +I +FVA V YKK+ ++FVD IPKS SGKI+R+ L+ ++ K Sbjct: 387 EICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVEYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVV--KSSEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 537 The following BLAST results are available for this feature:
BLAST of CN181984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181984 ID=CN181984; Name=CN181984; organism=Citrus sinensis; type=EST; length=572bpback to top |